RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 PTPN18Q99952 460 aa5.78□□□□□ -1.48
CASC4-211ENST00000561305 TANGO6Q9C0B7 1094 aa5.78□□□□□ -1.48
CASC4-211ENST00000561305 SEC61A2Q9H9S3 476 aa5.78□□□□□ -1.48
CASC4-211ENST00000561305 PFDN2Q9UHV9 154 aa5.78□□□□□ -1.48
CASC4-211ENST00000561305 TSC22D4Q9Y3Q8 395 aa5.78□□□□□ -1.48
CASC4-211ENST00000561305 PCDHA8Q9Y5H6 950 aa5.78□□□□□ -1.48
CASC4-211ENST00000561305 SLC4A7Q9Y6M7 1214 aa5.78□□□□□ -1.48
CASC4-211ENST00000561305 FAM90A27PA6NNH2 459 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 PATE3B3GLJ2 98 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 FAM153BP0C7A2 387 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 NAT1P18440 290 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 GABREP78334 506 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 SERINC3Q13530 473 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 BTBD8Q5XKL5 378 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 LRP10Q7Z4F1 713 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 RALYLQ86SE5 291 aaKnown RBP5.77□□□□□ -1.49
CASC4-211ENST00000561305 MTDHQ86UE4 582 aaKnown RBP5.77□□□□□ -1.49
CASC4-211ENST00000561305 C8orf37Q96NL8 207 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 DHRS4Q9BTZ2 278 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 JADE2Q9NQC1 790 aa5.77□□□□□ -1.49
CASC4-211ENST00000561305 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.76□□□□□ -1.49
CASC4-211ENST00000561305 H0Y858 1186 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 MAN2B1O00754 1011 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 PTPN1P18031 435 aaKnown RBP5.76□□□□□ -1.49
CASC4-211ENST00000561305 GUCY1A3Q02108 690 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 RBL2Q08999 1139 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 ARMC5Q96C12 935 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 IPO9Q96P70 1041 aaKnown RBP5.76□□□□□ -1.49
CASC4-211ENST00000561305 TACO1Q9BSH4 297 aaKnown RBP5.76□□□□□ -1.49
CASC4-211ENST00000561305 HIRIP3Q9BW71 556 aaPredicted RBP5.76□□□□□ -1.49
CASC4-211ENST00000561305 KLC2Q9H0B6 622 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 SLC39A2Q9NP94 309 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 CBLCQ9ULV8 474 aa5.76□□□□□ -1.49
CASC4-211ENST00000561305 CCDC85CA6NKD9 419 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 PYGMP11217 842 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 PDE6AP16499 860 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 GJA4P35212 333 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 ZXDAP98168 799 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 RASA3Q14644 834 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 FIGNQ5HY92 759 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 DPP8Q6V1X1 898 aaPredicted RBP5.75□□□□□ -1.49
CASC4-211ENST00000561305 OSTM1Q86WC4 334 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 KISS1RQ969F8 398 aaPredicted RBP5.75□□□□□ -1.49
CASC4-211ENST00000561305 CDK5RAP1Q96SZ6 601 aaKnown RBP5.75□□□□□ -1.49
CASC4-211ENST00000561305 CATSPERZQ9NTU4 200 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 RIC8BQ9NVN3 520 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 PPP1R1BQ9UD71 204 aaPredicted RBP5.75□□□□□ -1.49
CASC4-211ENST00000561305 ATP23Q9Y6H3 246 aa5.75□□□□□ -1.49
CASC4-211ENST00000561305 KDM2BQ8NHM5 1336 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 ZNF561-AS1K7EIQ3 104 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 GSTA4O15217 222 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 ZNF623O75123 536 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 POLD1P28340 1107 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 JAM2P57087 298 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 LACTBP83111 547 aaPredicted RBP5.74□□□□□ -1.49
CASC4-211ENST00000561305 TOP3AQ13472 1001 aaPredicted RBP5.74□□□□□ -1.49
CASC4-211ENST00000561305 USP10Q14694 798 aaKnown RBP5.74□□□□□ -1.49
CASC4-211ENST00000561305 R3HDM1Q15032 1099 aaKnown RBP5.74□□□□□ -1.49
CASC4-211ENST00000561305 ZC3H12BQ5HYM0 836 aaKnown RBP5.74□□□□□ -1.49
CASC4-211ENST00000561305 GPR155Q7Z3F1 870 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 PTRH1Q86Y79 214 aaKnown RBP5.74□□□□□ -1.49
CASC4-211ENST00000561305 Q8TCH9 128 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 MRPS23Q9Y3D9 190 aaKnown RBP5.74□□□□□ -1.49
CASC4-211ENST00000561305 PCDHA9Q9Y5H5 950 aa5.74□□□□□ -1.49
CASC4-211ENST00000561305 CUTAO60888 179 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 CLASP2O75122 1294 aaKnown RBP5.73□□□□□ -1.49
CASC4-211ENST00000561305 CRTAMO95727 393 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 C4BPAP04003 597 aaKnown RBP5.73□□□□□ -1.49
CASC4-211ENST00000561305 ZNF888P0CJ79 500 aaPredicted RBP5.73□□□□□ -1.49
CASC4-211ENST00000561305 SRGAP2CP0DJJ0 459 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 HERVK_113P62684 666 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 CRY1Q16526 586 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 SPRED1Q7Z699 444 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 SH3RF3Q8TEJ3 882 aaPredicted RBP5.73□□□□□ -1.49
CASC4-211ENST00000561305 CARD11Q9BXL7 1154 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 SEMA4AQ9H3S1 761 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 DEF6Q9H4E7 631 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 SMURF1Q9HCE7 757 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 TESMINQ9Y4I5 508 aa5.73□□□□□ -1.49
CASC4-211ENST00000561305 CCDC66A2RUB6 948 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 FAM221BA6H8Z2 402 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 KRT15P19012 456 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 PTGS1P23219 599 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 AOAHP28039 575 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 GTF2F1P35269 517 aaKnown RBP eCLIP5.72□□□□□ -1.49
CASC4-211ENST00000561305 SELENOPP49908 381 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 ST5P78524 1137 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 FAM47CQ5HY64 1035 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 TCTN3Q6NUS6 607 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 ZNF585AQ6P3V2 769 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 IFNL2Q8IZJ0 200 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 JMYQ8N9B5 988 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 GSTCDQ8NEC7 633 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 DEPDC7Q96QD5 511 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 LMF1Q96S06 567 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 GALNT8Q9NY28 637 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 BTBD7Q9P203 1132 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 ARHGAP28Q9P2N2 729 aa5.72□□□□□ -1.49
CASC4-211ENST00000561305 PTPN22Q9Y2R2 807 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms