RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PARNO95453 639 aaKnown RBP12.01□□□□□ -0.49
TPM1-229ENST00000561242 SMIM10L2AP0DMW4 78 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 SMIM10L2BP0DMW5 78 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 CCT6AP40227 531 aaKnown RBP12.01□□□□□ -0.49
TPM1-229ENST00000561242 RGS19P49795 217 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 SEMA3FQ13275 785 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 ITGB3BPQ13352 177 aaPredicted RBP12.01□□□□□ -0.49
TPM1-229ENST00000561242 PPP2R5CQ13362 524 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 PDIA5Q14554 519 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 NPY5RQ15761 445 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 XKR3Q5GH77 459 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 TMEM63BQ5T3F8 832 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 ABHD15Q6UXT9 468 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 METTL13Q8N6R0 699 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 MAP7D2Q96T17 732 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 FTOQ9C0B1 505 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPM1-229ENST00000561242 UNC45AQ9H3U1 944 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 HIPK3Q9H422 1215 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
TPM1-229ENST00000561242 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
TPM1-229ENST00000561242 GSTTP1A0A1W2PQM5 241 aa12□□□□□ -0.49
TPM1-229ENST00000561242 PSMD10O75832 226 aa12□□□□□ -0.49
TPM1-229ENST00000561242 F2P00734 622 aa12□□□□□ -0.49
TPM1-229ENST00000561242 COL6A1P12109 1028 aa12□□□□□ -0.49
TPM1-229ENST00000561242 PRPHP41219 470 aa12□□□□□ -0.49
TPM1-229ENST00000561242 CDC42EP1Q00587 391 aa12□□□□□ -0.49
TPM1-229ENST00000561242 NCBP1Q09161 790 aaKnown RBP12□□□□□ -0.49
TPM1-229ENST00000561242 TBC1D8BQ0IIM8 1120 aa12□□□□□ -0.49
TPM1-229ENST00000561242 LRRC26Q2I0M4 334 aa12□□□□□ -0.49
TPM1-229ENST00000561242 FOXD4L6Q3SYB3 417 aaPredicted RBP12□□□□□ -0.49
TPM1-229ENST00000561242 IER5Q5VY09 327 aa12□□□□□ -0.49
TPM1-229ENST00000561242 ARL6IP4Q66PJ3 421 aaKnown RBP12□□□□□ -0.49
TPM1-229ENST00000561242 CCSAPQ6IQ19 270 aaPredicted RBP12□□□□□ -0.49
TPM1-229ENST00000561242 TAF2Q6P1X5 1199 aa12□□□□□ -0.49
TPM1-229ENST00000561242 FOXD4L3Q6VB84 417 aaPredicted RBP12□□□□□ -0.49
TPM1-229ENST00000561242 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
TPM1-229ENST00000561242 ETNPPLQ8TBG4 499 aa12□□□□□ -0.49
TPM1-229ENST00000561242 CAGE1Q8TC20 777 aa12□□□□□ -0.49
TPM1-229ENST00000561242 ATP8B4Q8TF62 1192 aa12□□□□□ -0.49
TPM1-229ENST00000561242 CRYGNQ8WXF5 182 aa12□□□□□ -0.49
TPM1-229ENST00000561242 SLC7A3Q8WY07 619 aa12□□□□□ -0.49
TPM1-229ENST00000561242 TNFRSF25Q93038 417 aa12□□□□□ -0.49
TPM1-229ENST00000561242 MBOAT7Q96N66 472 aa12□□□□□ -0.49
TPM1-229ENST00000561242 NACC1Q96RE7 527 aa12□□□□□ -0.49
TPM1-229ENST00000561242 NT5C3AQ9H0P0 336 aa12□□□□□ -0.49
TPM1-229ENST00000561242 KCNMB3Q9NPA1 279 aa12□□□□□ -0.49
TPM1-229ENST00000561242 DNM3Q9UQ16 869 aa12□□□□□ -0.49
TPM1-229ENST00000561242 EMSYQ7Z589 1322 aa12□□□□□ -0.49
TPM1-229ENST00000561242 VWA3AA6NCI4 1184 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 KIF28PB7ZC32 967 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 LGR5O75473 907 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 ATG7O95352 703 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 OATP04181 439 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 CYP2C9P11712 490 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 ACTN1P12814 892 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 THPOP40225 353 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 POLGP54098 1239 aaPredicted RBP11.99□□□□□ -0.49
TPM1-229ENST00000561242 KRT85P78386 507 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 PTK7Q13308 1070 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.493e-10■■□□□ 12
TPM1-229ENST00000561242 GRIK4Q16099 956 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 XKR9Q5GH70 373 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 EARS2Q5JPH6 523 aaKnown RBP11.99□□□□□ -0.49
TPM1-229ENST00000561242 ANKRD33Q7Z3H0 272 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 NME8Q8N427 588 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 AFAP1L1Q8TED9 768 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 SNX29Q8TEQ0 813 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 CEP170P1Q96L14 293 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 AK8Q96MA6 479 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 EIF2AK1Q9BQI3 630 aaKnown RBP11.99□□□□□ -0.49
TPM1-229ENST00000561242 C16orf70Q9BSU1 422 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 SUGCTQ9HAC7 445 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 TUFT1Q9NNX1 390 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 BMP2KQ9NSY1 1161 aaPredicted RBP11.99□□□□□ -0.49
TPM1-229ENST00000561242 SETD4Q9NVD3 440 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 FAM13BQ9NYF5 915 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 GTF2IRD1Q9UHL9 959 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 TUBE1Q9UJT0 475 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 ZMYND8Q9ULU4 1186 aaPredicted RBP11.99□□□□□ -0.49
TPM1-229ENST00000561242 MTMR6Q9Y217 621 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 PPME1Q9Y570 386 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 PCDHB6Q9Y5E3 794 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 KDM3AQ9Y4C1 1321 aa11.99□□□□□ -0.49
TPM1-229ENST00000561242 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
TPM1-229ENST00000561242 ARHGEF35A5YM69 484 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 F13A1P00488 732 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 SSBP05455 408 aaKnown RBP eCLIP11.98□□□□□ -0.49
TPM1-229ENST00000561242 KRT18P05783 430 aaKnown RBP11.98□□□□□ -0.49
TPM1-229ENST00000561242 INSRRP14616 1297 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 PTGS1P23219 599 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 LONP1P36776 959 aaKnown RBP11.98□□□□□ -0.49
TPM1-229ENST00000561242 ME1P48163 572 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 IRX5P78411 483 aaPredicted RBP11.98□□□□□ -0.49
TPM1-229ENST00000561242 CYP4A11Q02928 519 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 MTERF2Q49AM1 385 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 SESTD1Q86VW0 696 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 TRIM50Q86XT4 487 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 BANK1Q8NDB2 785 aa11.98□□□□□ -0.49
TPM1-229ENST00000561242 KCNG4Q8TDN1 519 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms