RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 PCDHA11Q9Y5I1 949 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 MRVI1Q9Y6F6 885 aa8.4□□□□□ -1.06
GABPB1-211ENST00000561010 PLXNA4Q9HCM2 1894 aa8.4□□□□□ -1.07
GABPB1-211ENST00000561010 TTC3P53804 2025 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 MUC3AQ02505 3323 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PALM3A6NDB9 673 aaPredicted RBP8.39□□□□□ -1.07
GABPB1-211ENST00000561010 E7EWF7 191 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 IFIT3O14879 490 aaKnown RBP8.39□□□□□ -1.07
GABPB1-211ENST00000561010 KPNA6O60684 536 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 NBNO60934 754 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PRR20EP86478 221 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PRR20CP86479 221 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PRR20DP86480 221 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PRR20BP86481 221 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PRR20AP86496 221 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 GRM4Q14833 912 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PGM5Q15124 567 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 KIAA0753Q2KHM9 967 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 CCDC178Q5BJE1 867 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 TMEM67Q5HYA8 995 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 FAM117BQ6P1L5 589 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 MCF2L2Q86YR7 1114 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 DHX37Q8IY37 1157 aaKnown RBP8.39□□□□□ -1.07
GABPB1-211ENST00000561010 ARNTL2Q8WYA1 636 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 MTMR8Q96EF0 704 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 IWS1Q96ST2 819 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PDCD2LQ9BRP1 358 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 AMNQ9BXJ7 453 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 THEGQ9P2T0 379 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 RAPGEFL1Q9UHV5 662 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PNMA2Q9UL42 364 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 PCDHA1Q9Y5I3 950 aa8.39□□□□□ -1.07
GABPB1-211ENST00000561010 FNDC1Q4ZHG4 1894 aaPredicted RBP8.38□□□□□ -1.07
GABPB1-211ENST00000561010 B4DLN1 442 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 ZBTB5O15062 677 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 GGPS1O95749 300 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 CKBP12277 381 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 RXRAP19793 462 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 CASTP20810 708 aaKnown RBP8.38□□□□□ -1.07
GABPB1-211ENST00000561010 UBA1P22314 1058 aaKnown RBP8.38□□□□□ -1.07
GABPB1-211ENST00000561010 RPIAP49247 311 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 KCNQ1P51787 676 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 MRPL12P52815 198 aaKnown RBP8.38□□□□□ -1.07
GABPB1-211ENST00000561010 WDR5P61964 334 aaKnown RBP8.38□□□□□ -1.07
GABPB1-211ENST00000561010 TAP1Q03518 808 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 BFSP2Q13515 415 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 MBTPS1Q14703 1052 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 DGKDQ16760 1214 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 TRIM71Q2Q1W2 868 aaKnown RBP8.38□□□□□ -1.07
GABPB1-211ENST00000561010 HSDL1Q3SXM5 330 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 ZNF618Q5T7W0 954 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 LRRC8DQ7L1W4 858 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 HERC6Q8IVU3 1022 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 CMTR1Q8N1G2 835 aaKnown RBP8.38□□□□□ -1.07
GABPB1-211ENST00000561010 ADAMTS19Q8TE59 1207 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 SPATA33Q96N06 139 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 SEZ6LQ9BYH1 1024 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 GTF2IRD1Q9UHL9 959 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 MTUS1Q9ULD2 1270 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 C5orf42Q9H799 3197 aa8.38□□□□□ -1.07
GABPB1-211ENST00000561010 XIRP2A4UGR9 3374 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 hCG_1642624A0A1W2PR95 340 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 HAS3O00219 553 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 ST8SIA5O15466 376 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 EIF3JO75822 258 aaKnown RBP8.37□□□□□ -1.07
GABPB1-211ENST00000561010 F2P00734 622 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 PFKMP08237 780 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 ACTN1P12814 892 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 SELPP16109 830 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 RFC2P35250 354 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 MRPS9P82933 396 aaKnown RBP8.37□□□□□ -1.07
GABPB1-211ENST00000561010 SP4Q02446 784 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 PTPN11Q06124 597 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-211ENST00000561010 TRDNQ13061 729 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 SEMA3FQ13275 785 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 WTAPQ15007 396 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 CELF3Q5SZQ8 465 aaKnown RBP8.37□□□□□ -1.07
GABPB1-211ENST00000561010 VSIG10LQ86VR7 867 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 SESTD1Q86VW0 696 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 TRIM50Q86XT4 487 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 MB21D2Q8IYB1 491 aaPredicted RBP8.37□□□□□ -1.07
GABPB1-211ENST00000561010 C7orf31Q8N865 590 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 PPTC7Q8NI37 304 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 GDPD5Q8WTR4 605 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 ASB2Q96Q27 587 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 SLC9A7Q96T83 725 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 ZMYND15Q9H091 742 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 RIOX1Q9H6W3 641 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 RTEL1Q9NZ71 1219 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 RBM8AQ9Y5S9 174 aaKnown RBP8.37□□□□□ -1.07
GABPB1-211ENST00000561010 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
GABPB1-211ENST00000561010 PNMA6FA0A0J9YX94 578 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 GCOM1H8Y6P7 765 aaPredicted RBP8.36□□□□□ -1.07
GABPB1-211ENST00000561010 TNFRSF10AO00220 468 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 SGSM2O43147 1006 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 LPXNO60711 386 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 PLEKHA8P1O95397 391 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 CTSHP09668 335 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 POLR2MP0CAP2 368 aa8.36□□□□□ -1.07
GABPB1-211ENST00000561010 CCND2P30279 289 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms