RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 PTPROQ16827 1216 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 TAF2Q6P1X5 1199 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 MAPK8IP1Q9UQF2 711 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 A0A0G2JLL6 359 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-212ENST00000560801 PPFIA4O75335 1185 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 FGBP02675 491 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 ITGA4P13612 1032 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 GAP43P17677 238 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 STX17P56962 302 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 NLRP11P59045 1033 aaKnown RBP10.62□□□□□ -0.71
TRPM1-212ENST00000560801 SLFN12LQ6IEE8 588 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 PADI6Q6TGC4 694 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 PRRT2Q7Z6L0 340 aaPredicted RBP10.62□□□□□ -0.71
TRPM1-212ENST00000560801 RGS22Q8NE09 1264 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 CAGE1Q8TC20 777 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 KIFAP3Q92845 792 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 ACCSQ96QU6 501 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 MCOLN1Q9GZU1 580 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 DPP7Q9UHL4 492 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
TRPM1-212ENST00000560801 TLL1O43897 1013 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 MCM4P33991 863 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 LONP1P36776 959 aaKnown RBP10.62□□□□□ -0.71
TRPM1-212ENST00000560801 OR1G1P47890 313 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 MFSD10Q14728 455 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 KIAA1328Q86T90 577 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 DYDC2Q96IM9 177 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 AK8Q96MA6 479 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 HINFPQ9BQA5 517 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 MXRA8Q9BRK3 442 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 MSTO1Q9BUK6 570 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 IGFLR1Q9H665 355 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 ANAPC4Q9UJX5 808 aa10.62□□□□□ -0.71
TRPM1-212ENST00000560801 LMO7Q8WWI1 1683 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 PSEN2P49810 448 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 RAPGEF1Q13905 1077 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 NECTIN1Q15223 517 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 EFCAB12Q6NXP0 572 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 CPLX3Q8WVH0 158 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 LXNQ9BS40 222 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 ZCCHC17Q9NP64 241 aaKnown RBP10.61□□□□□ -0.71
TRPM1-212ENST00000560801 SEPT4O43236 478 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 ZNF286BP0CG31 522 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 FAM26FQ5R3K3 315 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 CFAP58Q5T655 872 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 SYTL5Q8TDW5 730 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-212ENST00000560801 PARVGQ9HBI0 331 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 PRG3Q9Y2Y8 225 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-212ENST00000560801 ELP1O95163 1332 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 SLURP2P0DP57 97 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 PPP2R3AQ06190 1150 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 MXD4Q14582 209 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-212ENST00000560801 METTL7BQ6UX53 244 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 WDR19Q8NEZ3 1342 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 BEST2Q8NFU1 509 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 LARP4BQ92615 738 aaKnown RBP10.61□□□□□ -0.71
TRPM1-212ENST00000560801 GJA10Q969M2 543 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
TRPM1-212ENST00000560801 PORCNQ9H237 461 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 MFSD1Q9H3U5 465 aa10.61□□□□□ -0.71
TRPM1-212ENST00000560801 FAM208AQ9UK61 1670 aaKnown RBP10.61□□□□□ -0.71
TRPM1-212ENST00000560801 PRRG1O14668 218 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 EPHA7Q15375 998 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 SURF1Q15526 300 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 TAF4BQ92750 862 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 PDCD2LQ9BRP1 358 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 SLC38A10Q9HBR0 1119 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 SETD4Q9NVD3 440 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 USP25Q9UHP3 1055 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 PLCH1Q4KWH8 1693 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 ASAP2O43150 1006 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 MMP1P03956 469 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 GHRP10912 638 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 NOL9Q5SY16 702 aaKnown RBP10.6□□□□□ -0.71
TRPM1-212ENST00000560801 LRP10Q7Z4F1 713 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 SCN4BQ8IWT1 228 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 SRBD1Q8N5C6 995 aaKnown RBP10.6□□□□□ -0.71
TRPM1-212ENST00000560801 KCNH7Q9NS40 1196 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 STXBP3O00186 592 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 LY6KQ17RY6 165 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 FAM173BQ6P4H8 233 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 IPO4Q8TEX9 1081 aaKnown RBP10.6□□□□□ -0.71
TRPM1-212ENST00000560801 YEATS4O95619 227 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 ACTN2P35609 894 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 ACTR2P61160 394 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 UBE2HP62256 183 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 PSMD2Q13200 908 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 ZNF484Q5JVG2 852 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 NUDT18Q6ZVK8 323 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 OTOP1Q7RTM1 612 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 SGMS1Q86VZ5 419 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 LRRC71Q8N4P6 559 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 CTNNBL1Q8WYA6 563 aaPredicted RBP10.6□□□□□ -0.71
TRPM1-212ENST00000560801 SYNPO2Q9UMS6 1093 aa10.6□□□□□ -0.71
TRPM1-212ENST00000560801 C2CD2LO14523 706 aa10.59□□□□□ -0.71
TRPM1-212ENST00000560801 HUS1O60921 280 aa10.59□□□□□ -0.71
TRPM1-212ENST00000560801 EFNA5P52803 228 aa10.59□□□□□ -0.71
TRPM1-212ENST00000560801 CACNB1Q02641 598 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms