RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 INSRRP14616 1297 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 TXKP42681 527 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 KRT76Q01546 638 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 FPGSQ05932 587 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 PPFIA1Q13136 1202 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 CUL4AQ13619 759 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 PLCB4Q15147 1175 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 SHHQ15465 462 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 NCAPH2Q6IBW4 605 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 PPP4R3AQ6IN85 833 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 MFSD5Q6N075 450 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 ZNF746Q6NUN9 644 aaPredicted RBP9.66□□□□□ -0.86
USP3-217ENST00000560070 NOSTRINQ8IVI9 506 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 CCDC60Q8IWA6 550 aaPredicted RBP9.66□□□□□ -0.86
USP3-217ENST00000560070 HSCBQ8IWL3 235 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 TMEM199Q8N511 208 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 IL27Q8NEV9 243 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 ETNPPLQ8TBG4 499 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 DHX38Q92620 1227 aaKnown RBP9.66□□□□□ -0.86
USP3-217ENST00000560070 HAS1Q92839 578 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 WNT8BQ93098 351 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 MBOAT7Q96N66 472 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 RIT2Q99578 217 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 NOC4LQ9BVI4 516 aaKnown RBP9.66□□□□□ -0.86
USP3-217ENST00000560070 FTOQ9C0B1 505 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP3-217ENST00000560070 FOXP1Q9H334 677 aaPredicted RBP9.66□□□□□ -0.86
USP3-217ENST00000560070 DISC1Q9NRI5 854 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 ERAP1Q9NZ08 941 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 PCDHA10Q9Y5I2 948 aa9.66□□□□□ -0.86
USP3-217ENST00000560070 A0A087WWV3 80 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 VPS37CA5D8V6 355 aaPredicted RBP9.65□□□□□ -0.86
USP3-217ENST00000560070 DDX11L8A8MPP1 907 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 WDR64B1ANS9 1081 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 EML1O00423 815 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 GNAT1P11488 350 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 GCFC2P16383 781 aaKnown RBP9.65□□□□□ -0.86
USP3-217ENST00000560070 ATP4AP20648 1035 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 THPOP40225 353 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 PTK7Q13308 1070 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 GRIK4Q16099 956 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 CALCRLQ16602 461 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 HABP4Q5JVS0 413 aaKnown RBP9.65□□□□□ -0.86
USP3-217ENST00000560070 C9orf50Q5SZB4 431 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 FOXD4L5Q5VV16 416 aaPredicted RBP9.65□□□□□ -0.86
USP3-217ENST00000560070 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 MOXD1Q6UVY6 613 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 RUFY4Q6ZNE9 571 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 ZNF365Q70YC5 407 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 C16orf59Q7L2K0 433 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 PLPPR4Q7Z2D5 763 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 SESTD1Q86VW0 696 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
USP3-217ENST00000560070 FAM20AQ96MK3 541 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 CTAGE1Q96RT6 745 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.86
USP3-217ENST00000560070 SH2D3AQ9BRG2 576 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 TMEM60Q9H2L4 133 aa9.65□□□□□ -0.86
USP3-217ENST00000560070 IGKV6D-21A0A0A0MT36 114 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 NEMFO60524 1076 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 FGBP02675 491 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 HSP90AA1P07900 732 aaKnown RBP9.64□□□□□ -0.87
USP3-217ENST00000560070 CTSHP09668 335 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 CKBP12277 381 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 KLRC1P26715 233 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 PPIGQ13427 754 aaKnown RBP eCLIP9.64□□□□□ -0.874e-6■■■□□ 16
USP3-217ENST00000560070 BFSP2Q13515 415 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 UGCGQ16739 394 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 TTC38Q5R3I4 469 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 MARCH8Q5T0T0 291 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 ZNF618Q5T7W0 954 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 OTOP2Q7RTS6 562 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 FERMT3Q86UX7 667 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 SMAP1Q8IYB5 467 aaPredicted RBP9.64□□□□□ -0.87
USP3-217ENST00000560070 BANK1Q8NDB2 785 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 LMBR1Q8WVP7 490 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 DNAJB3Q8WWF6 145 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 SNX21Q969T3 373 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 DYDC2Q96IM9 177 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.64□□□□□ -0.873e-6■□□□□ 10.1
USP3-217ENST00000560070 FAM49AQ9H0Q0 323 aaPredicted RBP9.64□□□□□ -0.87
USP3-217ENST00000560070 WNT8AQ9H1J5 351 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 KCNMB3Q9NPA1 279 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 NRBP2Q9NSY0 501 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 RGL1Q9NZL6 768 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 NOL7Q9UMY1 257 aaKnown RBP9.64□□□□□ -0.87
USP3-217ENST00000560070 PCDHA12Q9UN75 941 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 BRCA2P51587 3418 aa9.64□□□□□ -0.87
USP3-217ENST00000560070 ZNFX1Q9P2E3 1918 aaKnown RBP9.64□□□□□ -0.87
USP3-217ENST00000560070 NRCAMQ92823 1304 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 TMEM150BA6NC51 233 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 RRN3P2A6NIE6 340 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 ZBBXA8MT70 800 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 ZNF862O60290 1169 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 HBP1O60381 514 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 IQCF3P0C7M6 154 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 SELPP16109 830 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 U2AF2P26368 475 aaKnown RBP eCLIP9.63□□□□□ -0.874e-9■■■■□ 20.4
USP3-217ENST00000560070 BMP8BP34820 402 aa9.63□□□□□ -0.87
USP3-217ENST00000560070 TECP42680 631 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms