RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 EPB41P11171 864 aaKnown RBP6.01□□□□□ -1.45
GABPB1-207ENST00000558335 DESP17661 470 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 ATP2B4P23634 1241 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 RPL13P26373 211 aaKnown RBP6.01□□□□□ -1.45
GABPB1-207ENST00000558335 GBP1P32455 592 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 ADCY7P51828 1080 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 NEK2P51955 445 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 SMTNP53814 917 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 ERVK-24P63145 666 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 PAK2Q13177 524 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 MTMR3Q13615 1198 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 CUL3Q13618 768 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 NPY5RQ15761 445 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 CNGA3Q16281 694 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 CALCRLQ16602 461 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 USH1GQ495M9 461 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 ZNF394Q53GI3 561 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 HSP90AA4PQ58FG1 418 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 GPATCH4Q5T3I0 446 aaKnown RBP6.01□□□□□ -1.45
GABPB1-207ENST00000558335 CFAP58Q5T655 872 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 SFMBT2Q5VUG0 894 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 HAUS3Q68CZ6 603 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 PPP4R3AQ6IN85 833 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 MOXD1Q6UVY6 613 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 CCNI2Q6ZMN8 369 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-207ENST00000558335 BICDL1Q6ZP65 573 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 STXBP4Q6ZWJ1 553 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 USP49Q70CQ1 688 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 ARMC9Q7Z3E5 817 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 LCA5Q86VQ0 697 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 PEX5LQ8IYB4 626 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 SYCE1Q8N0S2 351 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 SYNE4Q8N205 404 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 ATP11CQ8NB49 1132 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 USP33Q8TEY7 942 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 LARP4BQ92615 738 aaKnown RBP6.01□□□□□ -1.45
GABPB1-207ENST00000558335 TAF4BQ92750 862 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 CAVIN3Q969G5 261 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 FAM163AQ96GL9 167 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-207ENST00000558335 RBM17Q96I25 401 aaKnown RBP6.01□□□□□ -1.45
GABPB1-207ENST00000558335 PBKQ96KB5 322 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 SLC4A9Q96Q91 983 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 MED15Q96RN5 788 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 RHOXF2Q9BQY4 288 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 TRIM4Q9C037 500 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 TTYH3Q9C0H2 523 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 BLZF1Q9H2G9 400 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 NDST4Q9H3R1 872 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 KIF9Q9HAQ2 790 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 CIDEBQ9UHD4 219 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 MAD2L2Q9UI95 211 aa6.01□□□□□ -1.45
GABPB1-207ENST00000558335 COL1A1P02452 1464 aaPredicted RBP6.01□□□□□ -1.45
GABPB1-207ENST00000558335 PITPNM2Q9BZ72 1349 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 COL16A1Q07092 1604 aaPredicted RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 GOLGA6L7A0A1B0GV03 622 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 SMCO2A6NFE2 343 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 TBX3O15119 743 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 CREB3O43889 395 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 KLRC4O43908 158 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 ZEB2O60315 1214 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 MTRF1O75570 445 aaKnown RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 PRDM1O75626 825 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 RPS6KA4O75676 772 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 AP1G2O75843 785 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 BBOX1O75936 387 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 SASH3O75995 380 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 KIAA0754O94854 1291 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 KIF4AO95239 1232 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 PENKP01210 267 aaPredicted RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 RPL17P18621 184 aaKnown RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 PLCG1P19174 1290 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 MAGEA1P43355 309 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 PAPOLAP51003 745 aaKnown RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 USP11P51784 963 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 MARSP56192 900 aaKnown RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 VSNL1P62760 191 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 GRAPQ13588 217 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 CUL1Q13616 776 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 MTF1Q14872 753 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 SEPT7Q16181 437 aaKnown RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 INF2Q27J81 1249 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 EDRF1Q3B7T1 1238 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 ERFEQ4G0M1 354 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 NAALADL2Q58DX5 795 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 SPDYCQ5MJ68 293 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 CAPRIN2Q6IMN6 1127 aaKnown RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 C8orf74Q6P047 294 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 C16orf86Q6ZW13 317 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 CMTR1Q8N1G2 835 aaKnown RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 TEX9Q8N6V9 391 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 PHC3Q8NDX5 983 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 GRAPLQ8TC17 118 aaPredicted RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 CCHCR1Q8TD31 782 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 TEKT4Q8WW24 435 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 TBC1D5Q92609 795 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 P3H4Q92791 437 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 CUL5Q93034 780 aa6□□□□□ -1.45
GABPB1-207ENST00000558335 ZKSCAN4Q969J2 545 aaPredicted RBP6□□□□□ -1.45
GABPB1-207ENST00000558335 LRRC45Q96CN5 670 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms