RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 BACH1O14867 736 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 SMIM10L2AP0DMW4 78 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 SMIM10L2BP0DMW5 78 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 GNAT1P11488 350 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 HOXC8P31273 242 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 BECN1Q14457 450 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 ZNF174Q15697 407 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 PTGISQ16647 500 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 GDF6Q6KF10 455 aaPredicted RBP13.56□□□□□ -0.24
CDK12-203ENST00000558240 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 BRAPQ7Z569 592 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 SH3RF1Q7Z6J0 888 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 CCDC60Q8IWA6 550 aaPredicted RBP13.56□□□□□ -0.24
CDK12-203ENST00000558240 TRMT13Q9NUP7 481 aaKnown RBP13.56□□□□□ -0.24
CDK12-203ENST00000558240 ZMYND8Q9ULU4 1186 aaPredicted RBP13.56□□□□□ -0.24
CDK12-203ENST00000558240 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
CDK12-203ENST00000558240 C17orf102A2RUQ5 167 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 TRIM43BA6NCK2 446 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 CHMP2AO43633 222 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 STX6O43752 255 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 PDXDC2PQ6P474 469 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 MIER3Q7Z3K6 550 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 PPP1R13LQ8WUF5 828 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 TRIM43Q96BQ3 446 aaPredicted RBP13.55□□□□□ -0.24
CDK12-203ENST00000558240 TMEM60Q9H2L4 133 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 PRDM5Q9NQX1 630 aaPredicted RBP13.55□□□□□ -0.24
CDK12-203ENST00000558240 MTMR6Q9Y217 621 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 NOD1Q9Y239 953 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 NRCAMQ92823 1304 aa13.55□□□□□ -0.24
CDK12-203ENST00000558240 MYH15Q9Y2K3 1946 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 RANBP2P49792 3224 aaKnown RBP13.54□□□□□ -0.24
CDK12-203ENST00000558240 POTEB3A0JP26 581 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 LAD1O00515 517 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 TIMP1P01033 207 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 OR52Z1P0C646 297 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 SYN1P17600 705 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 MARK3P27448 753 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 TXKP42681 527 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 ADAM17P78536 824 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 PLCB4Q15147 1175 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 PRPF38BQ5VTL8 546 aaKnown RBP13.54□□□□□ -0.24
CDK12-203ENST00000558240 POTEBQ6S5H4 581 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 C4orf32Q8N8J7 132 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 ATP8B4Q8TF62 1192 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
CDK12-203ENST00000558240 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.54□□□□□ -0.24
CDK12-203ENST00000558240 GABBR1Q9UBS5 961 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 PCDHB6Q9Y5E3 794 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 IGSF9BQ9UPX0 1349 aa13.54□□□□□ -0.24
CDK12-203ENST00000558240 RRN3P2A6NIE6 340 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 EML1O00423 815 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 HBP1O60381 514 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 CYP2C9P11712 490 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 RAG1P15918 1043 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 ATP4AP20648 1035 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 PPFIA1Q13136 1202 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 PTGDRQ13258 359 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 PTK7Q13308 1070 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 HIC1Q14526 733 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 NBR1Q14596 966 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 EPHA7Q15375 998 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 GRIK4Q16099 956 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 FERMT3Q86UX7 667 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 LMBR1Q8WVP7 490 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
CDK12-203ENST00000558240 FAM167AQ96KS9 214 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 LBHD1Q9BQE6 289 aaPredicted RBP13.53□□□□□ -0.24
CDK12-203ENST00000558240 NOC4LQ9BVI4 516 aaKnown RBP13.53□□□□□ -0.24
CDK12-203ENST00000558240 HIPK3Q9H422 1215 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 ZSCAN16Q9H4T2 348 aaPredicted RBP13.53□□□□□ -0.24
CDK12-203ENST00000558240 SETD4Q9NVD3 440 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 TRPC6Q9Y210 931 aa13.53□□□□□ -0.24
CDK12-203ENST00000558240 PITPNM1O00562 1244 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 TREHO43280 583 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 DKC1O60832 514 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDK12-203ENST00000558240 P4HBP07237 508 aaKnown RBP13.52□□□□□ -0.25
CDK12-203ENST00000558240 INSRRP14616 1297 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 ITGB8P26012 769 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 QARSP47897 775 aaKnown RBP13.52□□□□□ -0.25
CDK12-203ENST00000558240 PSMC5P62195 406 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 ZNF200P98182 395 aaPredicted RBP13.52□□□□□ -0.25
CDK12-203ENST00000558240 RBL2Q08999 1139 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 RESTQ13127 1097 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 BFSP2Q13515 415 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 ZNF484Q5JVG2 852 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 NCAPH2Q6IBW4 605 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 SERINC5Q86VE9 423 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 CKAP2LQ8IYA6 745 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 CCDC155Q8N6L0 562 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 SPRYD3Q8NCJ5 442 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 NRBP2Q9NSY0 501 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 COL1A2P08123 1366 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 LOXHD1Q8IVV2 1947 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 SCN5AQ14524 2016 aa13.52□□□□□ -0.25
CDK12-203ENST00000558240 TANC1Q9C0D5 1861 aa13.51□□□□□ -0.25
CDK12-203ENST00000558240 MBLAC1A4D2B0 266 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms