RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 PCDHA10Q9Y5I2 948 aa15.63■□□□□ 0.09
VPS33B-206ENST00000557358 MYH9P35579 1960 aaKnown RBP15.63■□□□□ 0.09
VPS33B-206ENST00000557358 WDR64B1ANS9 1081 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 RSPH10B2B2RC85 870 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 M0QZ92 97 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 TREHO43280 583 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 EFCAB14O75071 495 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 BAIAP3O94812 1187 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 LARGE1O95461 756 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 CTDNEP1O95476 244 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 RSPH10BP0C881 870 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 SFNP31947 248 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 MCM2P49736 904 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 ZNF200P98182 395 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-206ENST00000557358 RAB30Q15771 203 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 LETM2Q2VYF4 491 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 Q4G0T1 1027 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 LRCH2Q5VUJ6 765 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 FAM109BQ6ICB4 259 aaPredicted RBP15.62■□□□□ 0.09
VPS33B-206ENST00000557358 CCDC83Q8IWF9 413 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 DEFB123Q8N688 67 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 LMBR1Q8WVP7 490 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 DDX25Q9UHL0 483 aaKnown RBP15.62■□□□□ 0.09
VPS33B-206ENST00000557358 TUBE1Q9UJT0 475 aa15.62■□□□□ 0.09
VPS33B-206ENST00000557358 TANC1Q9C0D5 1861 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 TMEM265A0A087WTH1 108 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 POTEB3A0JP26 581 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 KIF28PB7ZC32 967 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 HBP1O60381 514 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 ATG7O95352 703 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 BAG4O95429 457 aaKnown RBP15.61■□□□□ 0.09
VPS33B-206ENST00000557358 HOXC8P31273 242 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 JAK3P52333 1124 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 IGBP1P78318 339 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 GNL2Q13823 731 aaKnown RBP15.61■□□□□ 0.09
VPS33B-206ENST00000557358 INF2Q27J81 1249 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 ZNF618Q5T7W0 954 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 POTEBQ6S5H4 581 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 PIK3AP1Q6ZUJ8 805 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 C16orf59Q7L2K0 433 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 DHX38Q92620 1227 aaKnown RBP15.61■□□□□ 0.09
VPS33B-206ENST00000557358 FAM167AQ96KS9 214 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 CEP131Q9UPN4 1083 aa15.61■□□□□ 0.09
VPS33B-206ENST00000557358 CYP3A7-CYP3A51PA0A087WV96 503 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 M0R2N6 131 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 MSH4O15457 936 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 CYP3A7P24462 503 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 IKBKEQ14164 716 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 SWSAP1Q6NVH7 229 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 CNKSR3Q6P9H4 555 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 ABHD15Q6UXT9 468 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 RDM1Q8NG50 284 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 C8orf76Q96K31 380 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 FAM20AQ96MK3 541 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 UIMC1Q96RL1 719 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 SLC9A7Q96T83 725 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 DISC1Q9NRI5 854 aa15.6■□□□□ 0.09
VPS33B-206ENST00000557358 ABHD14A-ACY1A0A1B0GW23 586 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 ADAMTS3O15072 1205 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 DHX15O43143 795 aaKnown RBP15.59■□□□□ 0.09
VPS33B-206ENST00000557358 CCNT1O60563 726 aaKnown RBP15.59■□□□□ 0.09
VPS33B-206ENST00000557358 JAK2O60674 1132 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 CCNE2O96020 404 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 MMP1P03956 469 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 INSRRP14616 1297 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 ATP2A2P16615 1042 aaKnown RBP15.59■□□□□ 0.09
VPS33B-206ENST00000557358 FOSBP53539 338 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 PLCB4Q15147 1175 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 ZNF484Q5JVG2 852 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 IER5Q5VY09 327 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 PPP4R3AQ6IN85 833 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 MIER3Q7Z3K6 550 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 PHOSPHO2Q8TCD6 241 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 ATP8B4Q8TF62 1192 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 BBXQ8WY36 941 aaPredicted RBP15.59■□□□□ 0.09
VPS33B-206ENST00000557358 SEPT8Q92599 483 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 SLC5A5Q92911 643 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 CTAGE1Q96RT6 745 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 NRBP2Q9NSY0 501 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 TELO2Q9Y4R8 837 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 SCN5AQ14524 2016 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 COL1A2P08123 1366 aa15.59■□□□□ 0.09
VPS33B-206ENST00000557358 IGKV6D-21A0A0A0MT36 114 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 CHMP2AO43633 222 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 DKC1O60832 514 aaKnown RBP eCLIP15.58■□□□□ 0.08
VPS33B-206ENST00000557358 TDP2O95551 362 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 CTSHP09668 335 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 FDPSP14324 419 aaKnown RBP15.58■□□□□ 0.08
VPS33B-206ENST00000557358 DNAJB2P25686 324 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 NPY5RQ15761 445 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 TRIM71Q2Q1W2 868 aaKnown RBP15.58■□□□□ 0.08
VPS33B-206ENST00000557358 RASIP1Q5U651 963 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 KRT40Q6A162 431 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 DIS3L2Q8IYB7 885 aaKnown RBP15.58■□□□□ 0.08
VPS33B-206ENST00000557358 SLFN12Q8IYM2 578 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 LENG9Q96B70 501 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 TIFAQ96CG3 184 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 PCYT2Q99447 389 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 GABBR1Q9UBS5 961 aa15.58■□□□□ 0.08
VPS33B-206ENST00000557358 MBLAC1A4D2B0 266 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms