RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CLEC4DQ8WXI8 215 aa6.22□□□□□ -1.41
ATXN3-246ENST00000557030 KISS1RQ969F8 398 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-246ENST00000557030 MKL1Q969V6 931 aa6.22□□□□□ -1.41
ATXN3-246ENST00000557030 EXOC2Q96KP1 924 aa6.22□□□□□ -1.41
ATXN3-246ENST00000557030 IPO9Q96P70 1041 aaKnown RBP6.22□□□□□ -1.41
ATXN3-246ENST00000557030 ADAM7Q9H2U9 754 aa6.22□□□□□ -1.41
ATXN3-246ENST00000557030 ZSWIM4Q9H7M6 989 aa6.22□□□□□ -1.41
ATXN3-246ENST00000557030 GPATCH8Q9UKJ3 1502 aaKnown RBP6.21□□□□□ -1.42
ATXN3-246ENST00000557030 TRBV23-1A0A0A0MS06 115 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 B8ZZF3 427 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 EPHA5P54756 1037 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 NKX3-2P78367 333 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 CCDC144BQ3MJ40 725 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 NT5DC1Q5TFE4 455 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 TTLL7Q6ZT98 887 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 STK32CQ86UX6 486 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 ADAMTS17Q8TE56 1095 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 TELO2Q9Y4R8 837 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 ATP10BO94823 1461 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 KIF14Q15058 1648 aa6.21□□□□□ -1.42
ATXN3-246ENST00000557030 KRIT1O00522 736 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 SLC27A2O14975 620 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 NKRFO15226 690 aaKnown RBP eCLIP6.2□□□□□ -1.42
ATXN3-246ENST00000557030 PRICKLE3O43900 615 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-246ENST00000557030 SMARCA5O60264 1052 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-246ENST00000557030 MAFKO60675 156 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 SOD2P04179 222 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 ZNF28P17035 718 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 DPH6Q7L8W6 267 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 MAMDC2Q7Z304 686 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-246ENST00000557030 PTPRN2Q92932 1015 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 TRAF6Q9Y4K3 522 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 DUSP10Q9Y6W6 482 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 ABCC10Q5T3U5 1492 aa6.2□□□□□ -1.42
ATXN3-246ENST00000557030 CNTLNQ9NXG0 1405 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 TCRBV5S4A2TA0A5A2 114 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 SUMO1P63165 101 aaKnown RBP6.19□□□□□ -1.42
ATXN3-246ENST00000557030 NFE2L2Q16236 605 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 SKOR2Q2VWA4 1001 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-246ENST00000557030 FAM26FQ5R3K3 315 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 TRIM48Q8IWZ4 208 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 SH3RF2Q8TEC5 729 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 MRFAP1L1Q96HT8 127 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 MPHOSPH9Q99550 1183 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 IPPKQ9H8X2 491 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 CAMSAP2Q08AD1 1489 aa6.19□□□□□ -1.42
ATXN3-246ENST00000557030 ADGRL2O95490 1459 aa6.18□□□□□ -1.42
ATXN3-246ENST00000557030 FAM47E-STBD1D6RA91 191 aa6.18□□□□□ -1.42
ATXN3-246ENST00000557030 ARVCFO00192 962 aa6.18□□□□□ -1.42
ATXN3-246ENST00000557030 COL6A2P12110 1019 aa6.18□□□□□ -1.42
ATXN3-246ENST00000557030 SYN1P17600 705 aa6.18□□□□□ -1.42
ATXN3-246ENST00000557030 ZC3H12BQ5HYM0 836 aaKnown RBP6.18□□□□□ -1.42
ATXN3-246ENST00000557030 LILRB2Q8N423 598 aa6.18□□□□□ -1.42
ATXN3-246ENST00000557030 DHRS4Q9BTZ2 278 aa6.18□□□□□ -1.42
ATXN3-246ENST00000557030 ANKRD30BQ9BXX2 1392 aa6.18□□□□□ -1.42
ATXN3-246ENST00000557030 NCOA1Q15788 1441 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 ITSN2Q9NZM3 1697 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 PZPP20742 1482 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 AQP7O14520 342 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 LTFP02788 710 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 HSPA5P11021 654 aaKnown RBP6.17□□□□□ -1.42
ATXN3-246ENST00000557030 COL6A1P12109 1028 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 FAHP16930 419 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 BUD31P41223 144 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-246ENST00000557030 SPIRE1Q08AE8 756 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 TUSC3Q13454 348 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 RBM12BQ8IXT5 1001 aaKnown RBP6.17□□□□□ -1.42
ATXN3-246ENST00000557030 PCDH19Q8TAB3 1148 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 KCNJ15Q99712 375 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 YIPF4Q9BSR8 244 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 PIF1Q9H611 641 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 RBPJLQ9UBG7 517 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 CFDP1Q9UEE9 299 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-246ENST00000557030 MRPS23Q9Y3D9 190 aaKnown RBP6.17□□□□□ -1.42
ATXN3-246ENST00000557030 ZBED9Q6R2W3 1325 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 SHROOM2Q13796 1616 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 CROCC2H7BZ55 1655 aa6.17□□□□□ -1.42
ATXN3-246ENST00000557030 C9orf118A6NHY6 69 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 GNAT1P11488 350 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 MLLT6P55198 1093 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-246ENST00000557030 GJA9P57773 515 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 GABREP78334 506 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 RGL3Q3MIN7 710 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 PAN2Q504Q3 1202 aaKnown RBP6.16□□□□□ -1.42
ATXN3-246ENST00000557030 C2orf27AQ580R0 203 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 TRIM61Q5EBN2 209 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 MTDHQ86UE4 582 aaKnown RBP6.16□□□□□ -1.42
ATXN3-246ENST00000557030 DTX3Q8N9I9 347 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 TXNDC5Q8NBS9 432 aaKnown RBP6.16□□□□□ -1.42
ATXN3-246ENST00000557030 GSTCDQ8NEC7 633 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 THAP3Q8WTV1 239 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-246ENST00000557030 ZCCHC14Q8WYQ9 949 aaKnown RBP6.16□□□□□ -1.42
ATXN3-246ENST00000557030 MBD6Q96DN6 1003 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 TMEM209Q96SK2 561 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 RBM15Q96T37 977 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATXN3-246ENST00000557030 DSEQ9UL01 958 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 PTCH2Q9Y6C5 1203 aa6.16□□□□□ -1.42
ATXN3-246ENST00000557030 ADGBQ8N7X0 1667 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms