RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SPAG1Q07617 926 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 IKQ13123 557 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 GRB10Q13322 594 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 NR1I3Q14994 352 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 FAM83BQ5T0W9 1011 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 KRT79Q5XKE5 535 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 DCAF15Q66K64 600 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 FOXR2Q6PJQ5 311 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 SV2BQ7L1I2 683 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 APOBEC3FQ8IUX4 373 aaKnown RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 VSTM4Q8IW00 320 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 SPICE1Q8N0Z3 855 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 ADSSL1Q8N142 457 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 KDF1Q8NAX2 398 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 RASSF8Q8NHQ8 419 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 DHTKD1Q96HY7 919 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 PNMA5Q96PV4 448 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 CTAGE1Q96RT6 745 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 WDR18Q9BV38 432 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 COL25A1Q9BXS0 654 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 TRIM9Q9C026 710 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 BLZF1Q9H2G9 400 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 PPP1R1BQ9UD71 204 aaPredicted RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 PCDHA12Q9UN75 941 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 MRPL11Q9Y3B7 192 aaKnown RBP9.29□□□□□ -0.92
ATXN3-235ENST00000556082 RABGAP1Q9Y3P9 1069 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 PPP2R3BQ9Y5P8 575 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 ABCB11O95342 1321 aa9.29□□□□□ -0.92
ATXN3-235ENST00000556082 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 GCOM1H8Y6P7 765 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 WDR46O15213 610 aaKnown RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 EGFRP00533 1210 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 POLR2MP0CAP2 368 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 CDK11BP21127 795 aaKnown RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 CASP1P29466 404 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 PAK1Q13153 545 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 TBX2Q13207 712 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 KIF4BQ2VIQ3 1234 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 APTXQ7Z2E3 356 aaKnown RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 LYSMD3Q7Z3D4 306 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 GPC2Q8N158 579 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 PRPF38AQ8NAV1 312 aaKnown RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 LRRC15Q8TF66 581 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 NOC3LQ8WTT2 800 aaKnown RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 RAD54LQ92698 747 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 STAMQ92783 540 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 NAP1L5Q96NT1 182 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 CNTNAP3BQ96NU0 1288 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 P2RX7Q99572 595 aaKnown RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 ZNF341Q9BYN7 854 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 CNTNAP3Q9BZ76 1288 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 MAF1Q9H063 256 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 NT5C3AQ9H0P0 336 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 BLOC1S4Q9NUP1 217 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 MAP3K20Q9NYL2 800 aaKnown RBP9.28□□□□□ -0.92
ATXN3-235ENST00000556082 HACL1Q9UJ83 578 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 PYCARDQ9ULZ3 195 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 PCDHB9Q9Y5E1 797 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 SYNRGQ9UMZ2 1314 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 KDM3AQ9Y4C1 1321 aa9.28□□□□□ -0.92
ATXN3-235ENST00000556082 MARCH6O60337 910 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 ICAM1P05362 532 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 FBXO45P0C2W1 286 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 LMNB1P20700 586 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 PRCPP42785 496 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 USP14P54578 494 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 KRT76Q01546 638 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 RASSF7Q02833 373 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 KCNMA1Q12791 1236 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 NR1H3Q13133 447 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 PSMD2Q13200 908 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 STIM1Q13586 685 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 TMC6Q7Z403 805 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 FILIP1Q7Z7B0 1213 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 ETNPPLQ8TBG4 499 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 NELFBQ8WX92 580 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 LARP4BQ92615 738 aaKnown RBP9.27□□□□□ -0.93
ATXN3-235ENST00000556082 LENG9Q96B70 501 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 CDK5RAP3Q96JB5 506 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 EHMT1Q9H9B1 1298 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 SAMSN1Q9NSI8 373 aaKnown RBP9.27□□□□□ -0.93
ATXN3-235ENST00000556082 INTS13Q9NVM9 706 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 GPRC5DQ9NZD1 345 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 LIMA1Q9UHB6 759 aaKnown RBP9.27□□□□□ -0.93
ATXN3-235ENST00000556082 GJA3Q9Y6H8 435 aa9.27□□□□□ -0.93
ATXN3-235ENST00000556082 PSMA7O14818 248 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 NRDCO43847 1150 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 SKILP12757 684 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 SFPQP23246 707 aaKnown RBP eCLIP9.26□□□□□ -0.93
ATXN3-235ENST00000556082 EEF1GP26641 437 aaKnown RBP9.26□□□□□ -0.93
ATXN3-235ENST00000556082 INPP5BP32019 993 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 SNAP25P60880 206 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 CCZ1BP86790 482 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 CCZ1P86791 482 aaPredicted RBP9.26□□□□□ -0.93
ATXN3-235ENST00000556082 EHHADHQ08426 723 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 SPIRE1Q08AE8 756 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 LRMPQ12912 555 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 USH1GQ495M9 461 aa9.26□□□□□ -0.93
ATXN3-235ENST00000556082 TBC1D10BQ4KMP7 808 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms