RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PGBD1Q96JS3 809 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 PDRG1Q9NUG6 133 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 TUBE1Q9UJT0 475 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 SQORQ9Y6N5 450 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 KAT6AQ92794 2004 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 IPO5O00410 1097 aaKnown RBP13.46□□□□□ -0.25
VRK1-204ENST00000555351 CDKL5O76039 1030 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 STAT5BP51692 787 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 CCT2P78371 535 aaKnown RBP13.46□□□□□ -0.25
VRK1-204ENST00000555351 ANKRD1Q15327 319 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 GRIK4Q16099 956 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.46□□□□□ -0.25
VRK1-204ENST00000555351 PCYT2Q99447 389 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 UPF3BQ9BZI7 483 aaKnown RBP13.46□□□□□ -0.25
VRK1-204ENST00000555351 PRDM12Q9H4Q4 367 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 NCOA5Q9HCD5 579 aaKnown RBP13.46□□□□□ -0.25
VRK1-204ENST00000555351 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 CHD9Q3L8U1 2897 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 PTPRSQ13332 1948 aa13.46□□□□□ -0.25
VRK1-204ENST00000555351 COL4A6Q14031 1691 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 DHX15O43143 795 aaKnown RBP13.45□□□□□ -0.26
VRK1-204ENST00000555351 TLL1O43897 1013 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 GJB5O95377 273 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 CA3P07451 260 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 MARCH8Q5T0T0 291 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 FAM160B1Q5W0V3 765 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 ZNF746Q6NUN9 644 aaPredicted RBP13.45□□□□□ -0.26
VRK1-204ENST00000555351 ABHD15Q6UXT9 468 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 SMAP1Q8IYB5 467 aaPredicted RBP13.45□□□□□ -0.26
VRK1-204ENST00000555351 DAGLBQ8NCG7 672 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 DBF4BQ8NFT6 615 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 RAD9AQ99638 391 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 COL1A2P08123 1366 aa13.45□□□□□ -0.26
VRK1-204ENST00000555351 STK36Q9NRP7 1315 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 CCNE2O96020 404 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 AMHP03971 560 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 INSRRP14616 1297 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 MYOGP15173 224 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 NLRP5P59047 1200 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 KRT76Q01546 638 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 TAP1Q03518 808 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 PLCB4Q15147 1175 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 MIS18BP1Q6P0N0 1132 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 USP38Q8NB14 1042 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 RIT2Q99578 217 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 ZNF577Q9BSK1 485 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 ZBED2Q9BTP6 218 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
VRK1-204ENST00000555351 VPS54Q9P1Q0 977 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 TCEAL9Q9UHQ7 104 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 PCDHA4Q9UN74 947 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 PCDHA2Q9Y5H9 948 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 CDH23Q9H251 3354 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 MICAL3Q7RTP6 2002 aa13.44□□□□□ -0.26
VRK1-204ENST00000555351 CYP3A7-CYP3A51PA0A087WV96 503 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 SMIM35A0A1B0GVV1 85 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 HBP1O60381 514 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 PFKFB2O60825 505 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 CHRNA1P02708 482 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 CYP3A7P24462 503 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 MARK3P27448 753 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 DEFB103AP81534 67 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 MGAT3Q09327 533 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 TCTN1Q2MV58 587 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 IER5Q5VY09 327 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 NME8Q8N427 588 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 ATP8B4Q8TF62 1192 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 LENG9Q96B70 501 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 IFIH1Q9BYX4 1025 aaKnown RBP13.43□□□□□ -0.26
VRK1-204ENST00000555351 SLKQ9H2G2 1235 aaPredicted RBP13.43□□□□□ -0.26
VRK1-204ENST00000555351 TRPC6Q9Y210 931 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 INSL6Q9Y581 213 aa13.43□□□□□ -0.26
VRK1-204ENST00000555351 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 M0R2N6 131 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 ADAMTS3O15072 1205 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 CTSHP09668 335 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 XBP1P17861 261 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 HTRA4P83105 476 aaPredicted RBP13.42□□□□□ -0.26
VRK1-204ENST00000555351 ADGRE1Q14246 886 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 PRR16Q569H4 304 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 ZNF484Q5JVG2 852 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 RUFY4Q6ZNE9 571 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 BLIDQ8IZY5 108 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 SP7Q8TDD2 431 aaPredicted RBP13.42□□□□□ -0.26
VRK1-204ENST00000555351 TOP1MTQ969P6 601 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 ZNF302Q9NR11 478 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 LMCD1Q9NZU5 365 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 PCDHA10Q9Y5I2 948 aa13.42□□□□□ -0.26
VRK1-204ENST00000555351 MAFBQ9Y5Q3 323 aaPredicted RBP13.42□□□□□ -0.26
VRK1-204ENST00000555351 SIP14410 1827 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 WDR64B1ANS9 1081 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 BACH1O14867 736 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 PSAPP07602 524 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 SFNP31947 248 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 ERVK-21P61565 698 aa13.41□□□□□ -0.26
VRK1-204ENST00000555351 MRPS6P82932 125 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms