RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 PKD2L1Q9P0L9 805 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 NOD1Q9Y239 953 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 SAMM50Q9Y512 469 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 PCDHA10Q9Y5I2 948 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 SPTBN4Q9H254 2564 aa11.97□□□□□ -0.49
TMEM260-206ENST00000555046 BACH1O14867 736 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 DHX15O43143 795 aaKnown RBP11.96□□□□□ -0.49
TMEM260-206ENST00000555046 SORBS3O60504 671 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
TMEM260-206ENST00000555046 DKC1O60832 514 aaKnown RBP eCLIP11.96□□□□□ -0.49
TMEM260-206ENST00000555046 DTNBO60941 627 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 ATG7O95352 703 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 F2P00734 622 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 LGALS2P05162 132 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 CLTBP09497 229 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 TCF7P36402 384 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-206ENST00000555046 PSEN2P49810 448 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 STAT5BP51692 787 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 JAK3P52333 1124 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-206ENST00000555046 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-206ENST00000555046 SP4Q02446 784 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 MFSD10Q14728 455 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 KIAA0753Q2KHM9 967 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 TRIM60Q495X7 471 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 RILPL1Q5EBL4 403 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 FAM47CQ5HY64 1035 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 SLC5A5Q92911 643 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 LBHD1Q9BQE6 289 aaPredicted RBP11.96□□□□□ -0.49
TMEM260-206ENST00000555046 C16orf70Q9BSU1 422 aa11.96□□□□□ -0.49
TMEM260-206ENST00000555046 MYH6P13533 1939 aa11.96□□□□□ -0.5
TMEM260-206ENST00000555046 PLXNA1Q9UIW2 1896 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 NRCAMQ92823 1304 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 GSTTP1A0A1W2PQM5 241 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 WDR64B1ANS9 1081 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 HAS3O00219 553 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 TDP2O95551 362 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 RPLP2P05387 115 aaKnown RBP11.95□□□□□ -0.5
TMEM260-206ENST00000555046 PTGS1P23219 599 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 CHMP4BP1P59074 171 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 PSMC6P62333 389 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 ITGB3BPQ13352 177 aaPredicted RBP11.95□□□□□ -0.5
TMEM260-206ENST00000555046 CALCRLQ16602 461 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 UTP14CQ5TAP6 766 aaKnown RBP11.95□□□□□ -0.5
TMEM260-206ENST00000555046 BRAPQ7Z569 592 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 KAT2BQ92831 832 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 LENG9Q96B70 501 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 DISC1Q9NRI5 854 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 NRBP2Q9NSY0 501 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 PCDHA12Q9UN75 941 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 PKD1L2Q7Z442 2459 aa11.95□□□□□ -0.5
TMEM260-206ENST00000555046 C17orf102A2RUQ5 167 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 RRN3P2A6NIE6 340 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 LAD1O00515 517 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 EDIL3O43854 480 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 NEMFO60524 1076 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 LGR5O75473 907 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 PSMD10O75832 226 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 ATP2B1P20020 1258 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 BFSP2Q13515 415 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 SWSAP1Q6NVH7 229 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 ABHD15Q6UXT9 468 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 FAM126BQ8IXS8 530 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 CCDC155Q8N6L0 562 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 RETREG2Q8NC44 543 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 ETNPPLQ8TBG4 499 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 AFAP1L1Q8TED9 768 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 ASB2Q96Q27 587 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 BCAS3Q9H6U6 928 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 ZNF302Q9NR11 478 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 STK24Q9Y6E0 443 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 USP34Q70CQ2 3546 aa11.94□□□□□ -0.5
TMEM260-206ENST00000555046 GRIN2DO15399 1336 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 EMSYQ7Z589 1322 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 IGKV6D-21A0A0A0MT36 114 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 DDX39AO00148 427 aaKnown RBP11.93□□□□□ -0.5
TMEM260-206ENST00000555046 KIAA0355O15063 1070 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 HBP1O60381 514 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 PARNO95453 639 aaKnown RBP11.93□□□□□ -0.5
TMEM260-206ENST00000555046 BMP15O95972 392 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 CD4P01730 458 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 ZNF286BP0CG31 522 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 RAG1P15918 1043 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 MCM7P33993 719 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 FAAP100Q0VG06 881 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 PTGISQ16647 500 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 EARS2Q5JPH6 523 aaKnown RBP11.93□□□□□ -0.5
TMEM260-206ENST00000555046 TTC38Q5R3I4 469 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 PDXDC2PQ6P474 469 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 MIER3Q7Z3K6 550 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 CKAP2LQ8IYA6 745 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 ATXN2LQ8WWM7 1075 aaKnown RBP11.93□□□□□ -0.5
TMEM260-206ENST00000555046 ATP6V0A1Q93050 837 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 FAM167AQ96KS9 214 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 NECAB3Q96P71 396 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-206ENST00000555046 RAB34Q9BZG1 259 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 ZSCAN16Q9H4T2 348 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-206ENST00000555046 KCNMB3Q9NPA1 279 aa11.93□□□□□ -0.5
TMEM260-206ENST00000555046 PRDM5Q9NQX1 630 aaPredicted RBP11.93□□□□□ -0.5
TMEM260-206ENST00000555046 HDAC6Q9UBN7 1215 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms