RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 B4DLN1 442 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 SEPT4O43236 478 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 XRRA1Q6P2D8 792 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 CCDC62Q6P9F0 684 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 ZNF710Q8N1W2 664 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 LENG9Q96B70 501 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.41■□□□□ 0.7
SHOX-204ENST00000554971 SMPD1P17405 629 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 CNGA1P29973 690 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 SP2Q02086 613 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 CEP55Q53EZ4 464 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 LHX8Q68G74 356 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 SH3RF1Q7Z6J0 888 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 UBE2Q2Q8WVN8 375 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 GSDMAQ96QA5 445 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 TMX1Q9H3N1 280 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 BCAS3Q9H6U6 928 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 EHMT1Q9H9B1 1298 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 FANCLQ9NW38 375 aa19.41■□□□□ 0.7
SHOX-204ENST00000554971 STAM2O75886 525 aa19.4■□□□□ 0.7
SHOX-204ENST00000554971 ZNF18P17022 549 aa19.4■□□□□ 0.7
SHOX-204ENST00000554971 BMP6P22004 513 aa19.4■□□□□ 0.7
SHOX-204ENST00000554971 CIITAP33076 1130 aa19.4■□□□□ 0.7
SHOX-204ENST00000554971 ISM2Q6H9L7 571 aa19.4■□□□□ 0.7
SHOX-204ENST00000554971 MXRA8Q9BRK3 442 aa19.4■□□□□ 0.7
SHOX-204ENST00000554971 CCDC94Q9BW85 323 aaPredicted RBP19.4■□□□□ 0.7
SHOX-204ENST00000554971 RNF208Q9H0X6 261 aa19.4■□□□□ 0.7
SHOX-204ENST00000554971 MEIS1O00470 390 aa19.39■□□□□ 0.7
SHOX-204ENST00000554971 TDP2O95551 362 aa19.39■□□□□ 0.7
SHOX-204ENST00000554971 ATP1A3P13637 1013 aa19.39■□□□□ 0.7
SHOX-204ENST00000554971 AKR1A1P14550 325 aa19.39■□□□□ 0.7
SHOX-204ENST00000554971 USP11P51784 963 aa19.39■□□□□ 0.7
SHOX-204ENST00000554971 ATP2C1P98194 919 aaPredicted RBP19.39■□□□□ 0.7
SHOX-204ENST00000554971 LY6KQ17RY6 165 aa19.39■□□□□ 0.7
SHOX-204ENST00000554971 SCFD2Q8WU76 684 aa19.39■□□□□ 0.7
SHOX-204ENST00000554971 GNEQ9Y223 722 aaKnown RBP19.39■□□□□ 0.7
SHOX-204ENST00000554971 ICAM3P32942 547 aa19.39■□□□□ 0.69
SHOX-204ENST00000554971 IRX5P78411 483 aaPredicted RBP19.39■□□□□ 0.69
SHOX-204ENST00000554971 GRIN1Q05586 938 aa19.39■□□□□ 0.69
SHOX-204ENST00000554971 TTC38Q5R3I4 469 aa19.39■□□□□ 0.69
SHOX-204ENST00000554971 E4F1Q66K89 784 aaPredicted RBP19.39■□□□□ 0.69
SHOX-204ENST00000554971 ARL6IP4Q66PJ3 421 aaKnown RBP19.39■□□□□ 0.69
SHOX-204ENST00000554971 NEK8Q86SG6 692 aa19.39■□□□□ 0.69
SHOX-204ENST00000554971 COPS5Q92905 334 aa19.39■□□□□ 0.69
SHOX-204ENST00000554971 JADE2Q9NQC1 790 aa19.39■□□□□ 0.69
SHOX-204ENST00000554971 KCNH7Q9NS40 1196 aa19.39■□□□□ 0.69
SHOX-204ENST00000554971 DDX20Q9UHI6 824 aaKnown RBP19.39■□□□□ 0.69
SHOX-204ENST00000554971 DDX41Q9UJV9 622 aaKnown RBP19.39■□□□□ 0.69
SHOX-204ENST00000554971 TNRC18O15417 2968 aaPredicted RBP19.38■□□□□ 0.69
SHOX-204ENST00000554971 WDR81Q562E7 1941 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 SPATA31C2B4DYI2 1134 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 ATP9AO75110 1047 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 ARP10275 920 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 LETM2Q2VYF4 491 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 SPECC1Q5M775 1068 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 MBOAT7Q96N66 472 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 DEFB118Q96PH6 123 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 FAM184BQ9ULE4 1060 aa19.38■□□□□ 0.69
SHOX-204ENST00000554971 CYP3A7-CYP3A51PA0A087WV96 503 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 USP27XA6NNY8 438 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 SLC37A4O43826 429 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 UBA1P22314 1058 aaKnown RBP19.37■□□□□ 0.69
SHOX-204ENST00000554971 CYP3A7P24462 503 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 TNFAIP2Q03169 654 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 MTMR1Q13613 665 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 DUSP28Q4G0W2 176 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 IQSEC1Q6DN90 963 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 GPRASP2Q96D09 838 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 ABHD8Q96I13 439 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 TXNP10599 105 aaKnown RBP19.37■□□□□ 0.69
SHOX-204ENST00000554971 TTLL4Q14679 1199 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 GNPTABQ3T906 1256 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 PRR16Q569H4 304 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 UIMC1Q96RL1 719 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 NFE2L3Q9Y4A8 694 aa19.37■□□□□ 0.69
SHOX-204ENST00000554971 KCNA2P16389 499 aa19.36■□□□□ 0.69
SHOX-204ENST00000554971 ATP2B1P20020 1258 aa19.36■□□□□ 0.69
SHOX-204ENST00000554971 CDK11BP21127 795 aaKnown RBP19.36■□□□□ 0.69
SHOX-204ENST00000554971 ZNF76P36508 570 aa19.36■□□□□ 0.69
SHOX-204ENST00000554971 TBX2Q13207 712 aaPredicted RBP19.36■□□□□ 0.69
SHOX-204ENST00000554971 PDCL2Q8N4E4 241 aa19.36■□□□□ 0.69
SHOX-204ENST00000554971 IQUBQ8NA54 791 aa19.36■□□□□ 0.69
SHOX-204ENST00000554971 PPP1R13BQ96KQ4 1090 aa19.36■□□□□ 0.69
SHOX-204ENST00000554971 TELO2Q9Y4R8 837 aa19.36■□□□□ 0.69
SHOX-204ENST00000554971 SYNRGQ9UMZ2 1314 aa19.36■□□□□ 0.69
SHOX-204ENST00000554971 GOLGA6L9A6NEM1 432 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 ARHGAP6O43182 974 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 ZSCAN12O43309 604 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 CCNT1O60563 726 aaKnown RBP19.35■□□□□ 0.69
SHOX-204ENST00000554971 DUSP11O75319 330 aaKnown RBP19.35■□□□□ 0.69
SHOX-204ENST00000554971 GJB1P08034 283 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 TGFB3P10600 412 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 ITGB3BPQ13352 177 aaPredicted RBP19.35■□□□□ 0.69
SHOX-204ENST00000554971 SPATA1Q5VX52 437 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 PPP4R3AQ6IN85 833 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 MOXD1Q6UVY6 613 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 NIPA1Q7RTP0 329 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 GJA10Q969M2 543 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 PAGE5Q96GU1 130 aa19.35■□□□□ 0.69
SHOX-204ENST00000554971 CTAGE1Q96RT6 745 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms