RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 NUMBP49757 651 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 PSEN2P49810 448 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 EPHB4P54760 987 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TRAF1Q13077 416 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 PPIGQ13427 754 aaKnown RBP eCLIP2.82□□□□□ -1.963e-9■■■■□ 25.1
PRPF39-205ENST00000554081 NEDD9Q14511 834 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 PLCB4Q15147 1175 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 SBK1Q52WX2 424 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 XP32Q5T750 250 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 FAM102BQ5T8I3 360 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 PLPP4Q5VZY2 271 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 PLA2G4FQ68DD2 849 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 APOA5Q6Q788 366 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 KSR1Q8IVT5 923 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 FAM133AQ8N9E0 248 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 RDH13Q8NBN7 331 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TBCKQ8TEA7 893 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 IPO4Q8TEX9 1081 aaKnown RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 CCDC12Q8WUD4 166 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 AUTS2Q8WXX7 1259 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TMEM143Q96AN5 459 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TRIM43Q96BQ3 446 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF775Q96BV0 537 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 SHISA4Q96DD7 197 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 EEF2KMTQ96G04 330 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 ALDH8A1Q9H2A2 487 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 MFSD1Q9H3U5 465 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 POLR3EQ9NVU0 708 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 RGL1Q9NZL6 768 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 ANKRD26Q9UPS8 1709 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 BOLA1Q9Y3E2 137 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TELO2Q9Y4R8 837 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 CABIN1Q9Y6J0 2220 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 CACNA1AO00555 2505 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 BTBD18B2RXH4 712 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TRAK2O60296 914 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 POMCP01189 267 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 GNAT1P11488 350 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 XRCC5P13010 732 aaKnown RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TECP42680 631 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 OR1G1P47890 313 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 GATMP50440 423 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 DEFB103AP81534 67 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 CCDC157Q569K6 752 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 SH3D19Q5HYK7 790 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF618Q5T7W0 954 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 LARP1BQ659C4 914 aaKnown RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF787Q6DD87 383 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 IQSEC1Q6DN90 963 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 GIMAP6Q6P9H5 292 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 POTEEQ6S8J3 1075 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 PHF6Q8IWS0 365 aaKnown RBP eCLIP2.82□□□□□ -1.967e-10■■■□□ 15.3
PRPF39-205ENST00000554081 TRMT44Q8IYL2 757 aaKnown RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 PAF1Q8N7H5 531 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 FLCNQ8NFG4 579 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 SEPT1Q8WYJ6 367 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 SPATA32Q96LK8 384 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TTC14Q96N46 770 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 CDX2Q99626 313 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 ADAM2Q99965 735 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 DSCC1Q9BVC3 393 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 USP26Q9BXU7 913 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 C22orf23Q9BZE7 217 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 JPH1Q9HDC5 661 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 COL20A1Q9P218 1284 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 ANKFY1Q9P2R3 1169 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 MORF4L1Q9UBU8 362 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 SLC9A2Q9UBY0 812 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 PUF60Q9UHX1 559 aaKnown RBP2.82□□□□□ -1.96
PRPF39-205ENST00000554081 HES2Q9Y543 173 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 NUB1Q9Y5A7 615 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 TRIOO75962 3097 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 SPEF2Q9C093 1822 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 SSC5DA1L4H1 1573 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 ATG2BQ96BY7 2078 aa2.82□□□□□ -1.96
PRPF39-205ENST00000554081 EPG5Q9HCE0 2579 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 AKAP11Q9UKA4 1901 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 MYH2Q9UKX2 1941 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 SCAMP3O14828 347 aaKnown RBP2.81□□□□□ -1.96
PRPF39-205ENST00000554081 SPTLC1O15269 473 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 ADCY6O43306 1168 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 CNMDO75829 334 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 TDP2O95551 362 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 CYBAP13498 195 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 SCG2P13521 617 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 UBA1P22314 1058 aaKnown RBP2.81□□□□□ -1.96
PRPF39-205ENST00000554081 CDC27P30260 824 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 PPM1FP49593 454 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-205ENST00000554081 FXR1P51114 621 aaKnown RBP eCLIP2.81□□□□□ -1.96
PRPF39-205ENST00000554081 SPAG1Q07617 926 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 PAK2Q13177 524 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 IRF5Q13568 498 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 MOGSQ13724 837 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 LAMC2Q13753 1193 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 DUSP28Q4G0W2 176 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 GLRA4Q5JXX5 417 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 GDF6Q6KF10 455 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-205ENST00000554081 TMC5Q6UXY8 1006 aa2.81□□□□□ -1.96
PRPF39-205ENST00000554081 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.81□□□□□ -1.96
PRPF39-205ENST00000554081 PALB2Q86YC2 1186 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms