RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CCND2P30279 289 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 GRM4Q14833 912 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 FOXD4L6Q3SYB3 417 aaPredicted RBP18.19■□□□□ 0.5
ACTN1-209ENST00000553659 CCDC183Q5T5S1 534 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 FOXD4L3Q6VB84 417 aaPredicted RBP18.19■□□□□ 0.5
ACTN1-209ENST00000553659 HOMER1Q86YM7 354 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 C8orf76Q96K31 380 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 SPATA32Q96LK8 384 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 BRWD1Q9NSI6 2320 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 MTUS1Q9ULD2 1270 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 INSL6Q9Y581 213 aa18.19■□□□□ 0.5
ACTN1-209ENST00000553659 BDP1A6H8Y1 2624 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 RSPH10B2B2RC85 870 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 H3BRB1 525 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 RSPH10BP0C881 870 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 CALM1P0DP23 149 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 CALM2P0DP24 149 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 CALM3P0DP25 149 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 THPOP40225 353 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 SLC35G1Q2M3R5 365 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 FAM117BQ6P1L5 589 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 LRSAM1Q6UWE0 723 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.18■□□□□ 0.5
ACTN1-209ENST00000553659 BRAPQ7Z569 592 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 FERMT3Q86UX7 667 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 FCHSD1Q86WN1 690 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 DBF4BQ8NFT6 615 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 GPKOWQ92917 476 aaPredicted RBP eCLIP18.18■□□□□ 0.5
ACTN1-209ENST00000553659 ZFP91Q96JP5 570 aaPredicted RBP18.18■□□□□ 0.5
ACTN1-209ENST00000553659 PIGSQ96S52 555 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 TUT1Q9H6E5 874 aaKnown RBP18.18■□□□□ 0.5
ACTN1-209ENST00000553659 GDPD2Q9HCC8 539 aa18.18■□□□□ 0.5
ACTN1-209ENST00000553659 PNMA6FA0A0J9YX94 578 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 C17orf102A2RUQ5 167 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 GOLGA6L4A6NEF3 574 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 AMHP03971 560 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 HOXC8P31273 242 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 MKRN4PQ13434 485 aaPredicted RBP18.17■□□□□ 0.5
ACTN1-209ENST00000553659 FBXO18Q8NFZ0 1043 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 ATP6V0A1Q93050 837 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 EPHX3Q9H6B9 360 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 TMEM63CQ9P1W3 806 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 XIRP2A4UGR9 3374 aa18.17■□□□□ 0.5
ACTN1-209ENST00000553659 NLRC5Q86WI3 1866 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 CYTH3O43739 400 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 STAM2O75886 525 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 FDPSP14324 419 aaKnown RBP18.16■□□□□ 0.5
ACTN1-209ENST00000553659 IFNAR1P17181 557 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 TRIM29Q14134 588 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 RTN1Q16799 776 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 PLEKHG4Q58EX7 1191 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 MICU3Q86XE3 530 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 TRIM22Q8IYM9 498 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 ANP32BQ92688 251 aaKnown RBP18.16■□□□□ 0.5
ACTN1-209ENST00000553659 CHAMP1Q96JM3 812 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 RNPEPQ9H4A4 650 aa18.16■□□□□ 0.5
ACTN1-209ENST00000553659 RBM28Q9NW13 759 aaKnown RBP18.16■□□□□ 0.5
ACTN1-209ENST00000553659 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.15■□□□□ 0.5
ACTN1-209ENST00000553659 RBAK-RBAKDNI3L0D1 243 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 GADD45BO75293 160 aaPredicted RBP18.15■□□□□ 0.5
ACTN1-209ENST00000553659 LGALS2P05162 132 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 SMIM10L2AP0DMW4 78 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 SMIM10L2BP0DMW5 78 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 ICAM3P32942 547 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 MRPS9P82933 396 aaKnown RBP18.15■□□□□ 0.5
ACTN1-209ENST00000553659 HTRA4P83105 476 aaPredicted RBP18.15■□□□□ 0.5
ACTN1-209ENST00000553659 SSRP1Q08945 709 aaKnown RBP18.15■□□□□ 0.5
ACTN1-209ENST00000553659 TROAPQ12815 778 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 GNPTABQ3T906 1256 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 MYOCDQ8IZQ8 938 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 LEO1Q8WVC0 666 aaPredicted RBP18.15■□□□□ 0.5
ACTN1-209ENST00000553659 BCAS3Q9H6U6 928 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 SENP2Q9HC62 589 aa18.15■□□□□ 0.5
ACTN1-209ENST00000553659 NOP56O00567 594 aaKnown RBP18.14■□□□□ 0.49
ACTN1-209ENST00000553659 TREHO43280 583 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 CAND2O75155 1236 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 DDAH1O94760 285 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 PLA2G5P39877 138 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 NEDD9Q14511 834 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 CATIPQ7Z7H3 387 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 FBXO22Q8NEZ5 403 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 SP7Q8TDD2 431 aaPredicted RBP18.14■□□□□ 0.49
ACTN1-209ENST00000553659 SEPT8Q92599 483 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 INPP4AQ96PE3 977 aaPredicted RBP18.14■□□□□ 0.49
ACTN1-209ENST00000553659 C17orf80Q9BSJ5 609 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 UBE2ZQ9H832 354 aaPredicted RBP18.14■□□□□ 0.49
ACTN1-209ENST00000553659 FRMPD4Q14CM0 1322 aa18.14■□□□□ 0.49
ACTN1-209ENST00000553659 SPATA31C2B4DYI2 1134 aa18.13■□□□□ 0.49
ACTN1-209ENST00000553659 GNAT1P11488 350 aa18.13■□□□□ 0.49
ACTN1-209ENST00000553659 XRCC6P12956 609 aaKnown RBP eCLIP18.13■□□□□ 0.49
ACTN1-209ENST00000553659 METTL7BQ6UX53 244 aa18.13■□□□□ 0.49
ACTN1-209ENST00000553659 ZNF654Q8IZM8 581 aa18.13■□□□□ 0.49
ACTN1-209ENST00000553659 FAM122AQ96E09 287 aa18.13■□□□□ 0.49
ACTN1-209ENST00000553659 LRFN3Q9BTN0 628 aa18.13■□□□□ 0.49
ACTN1-209ENST00000553659 DDX19AQ9NUU7 478 aaKnown RBP18.13■□□□□ 0.49
ACTN1-209ENST00000553659 RALGAPA2Q2PPJ7 1873 aa18.13■□□□□ 0.49
ACTN1-209ENST00000553659 ADD1P35611 737 aaKnown RBP18.12■□□□□ 0.49
ACTN1-209ENST00000553659 SEMA3FQ13275 785 aa18.12■□□□□ 0.49
ACTN1-209ENST00000553659 NTRK3Q16288 839 aa18.12■□□□□ 0.49
ACTN1-209ENST00000553659 LEXMQ3ZCV2 418 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms