RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 APOL5Q9BWW9 433 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 IRF2BPLQ9H1B7 796 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 TLE6Q9H808 572 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 CDH22Q9UJ99 828 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 CDY2AQ9Y6F7 541 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 WDR87Q6ZQQ6 2873 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 DMXL1Q9Y485 3027 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 PLXNA4Q9HCM2 1894 aa14.99□□□□□ -0.01
VPS29-211ENST00000553128 NRCAMQ92823 1304 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 SPATA31C2B4DYI2 1134 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 B4E1Z4 1266 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 ZBTB5O15062 677 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 ATF7P17544 494 aaPredicted RBP14.98□□□□□ -0.01
VPS29-211ENST00000553128 NAALADL2Q58DX5 795 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 MARCH8Q5T0T0 291 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 TSHZ1Q6ZSZ6 1077 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 TMEM105Q8N8V8 129 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 INPP4AQ96PE3 977 aaPredicted RBP14.98□□□□□ -0.01
VPS29-211ENST00000553128 S1PR5Q9H228 398 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 SMOC2Q9H3U7 446 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 RNF41Q9H4P4 317 aaPredicted RBP14.98□□□□□ -0.01
VPS29-211ENST00000553128 MAP3K20Q9NYL2 800 aaKnown RBP14.98□□□□□ -0.01
VPS29-211ENST00000553128 HCSTQ9UBK5 93 aa14.98□□□□□ -0.01
VPS29-211ENST00000553128 ZNF215Q9UL58 517 aaPredicted RBP14.98□□□□□ -0.01
VPS29-211ENST00000553128 RIF1Q5UIP0 2472 aaKnown RBP14.97□□□□□ -0.01
VPS29-211ENST00000553128 GCOM1H8Y6P7 765 aaPredicted RBP14.97□□□□□ -0.01
VPS29-211ENST00000553128 POLR2MP0CAP2 368 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 MARK3P27448 753 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 NBL1P41271 181 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 ERVFC1P60507 584 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 NEDD9Q14511 834 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 IQCA1Q86XH1 822 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 HOMER1Q86YM7 354 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 ZSWIM5Q9P217 1185 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 MAD2L2Q9UI95 211 aa14.97□□□□□ -0.01
VPS29-211ENST00000553128 KLRF2D3W0D1 207 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 ZNF213O14771 459 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 ARP10275 920 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 IBSPP21815 317 aaPredicted RBP14.96□□□□□ -0.01
VPS29-211ENST00000553128 PPFIA1Q13136 1202 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 GRIK4Q16099 956 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 DUSP6Q16828 381 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 TAF2Q6P1X5 1199 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 FRMD5Q7Z6J6 570 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 ZBTB33Q86T24 672 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 NPAS4Q8IUM7 802 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 KREMEN2Q8NCW0 462 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 MICAL1Q8TDZ2 1067 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 PIGSQ96S52 555 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 TUBE1Q9UJT0 475 aa14.96□□□□□ -0.01
VPS29-211ENST00000553128 FRMPD4Q14CM0 1322 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 MBLAC1A4D2B0 266 aaPredicted RBP14.95□□□□□ -0.02
VPS29-211ENST00000553128 BRD1O95696 1058 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 ID4P47928 161 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 MRPS6P82932 125 aaKnown RBP14.95□□□□□ -0.02
VPS29-211ENST00000553128 TMEM62Q0P6H9 643 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 KCNC3Q14003 757 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 GNPTABQ3T906 1256 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 SYCE2Q6PIF2 218 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 ERMP1Q7Z2K6 904 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 NEK1Q96PY6 1258 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 FAM49AQ9H0Q0 323 aaPredicted RBP14.95□□□□□ -0.02
VPS29-211ENST00000553128 TMX1Q9H3N1 280 aa14.95□□□□□ -0.02
VPS29-211ENST00000553128 FAM186AA6NE01 2351 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 FIBPO43427 364 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 SCG2P13521 617 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 TCF7P36402 384 aaPredicted RBP14.94□□□□□ -0.02
VPS29-211ENST00000553128 NUBP1P53384 320 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 PDE1AP54750 535 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 IGBP1P78318 339 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 APOBRQ0VD83 1088 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 CCDC178Q5BJE1 867 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 LLGL2Q6P1M3 1020 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 RSPH3Q86UC2 560 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 SAMD3Q8N6K7 520 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 PADI3Q9ULW8 664 aa14.94□□□□□ -0.02
VPS29-211ENST00000553128 GSTTP1A0A1W2PQM5 241 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 PALM3A6NDB9 673 aaPredicted RBP14.93□□□□□ -0.02
VPS29-211ENST00000553128 FSCN2O14926 492 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 CYTH3O43739 400 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 ATP9AO75110 1047 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 TECP42680 631 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 ANKRD54Q6NXT1 300 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 ADSSL1Q8N142 457 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 TSHZ2Q9NRE2 1034 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 FRYLO94915 3013 aa14.93□□□□□ -0.02
VPS29-211ENST00000553128 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 MGEA5O60502 916 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 FGF18O76093 207 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 STAG3L1P0CL83 205 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 SEC23AQ15436 765 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 TMEM266Q2M3C6 531 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 IFIT1BQ5T764 474 aaKnown RBP14.92□□□□□ -0.02
VPS29-211ENST00000553128 FAM102BQ5T8I3 360 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 ANKRD45Q5TZF3 282 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 PLPP4Q5VZY2 271 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 TMEM184AQ6ZMB5 413 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 SENP7Q9BQF6 1050 aa14.92□□□□□ -0.02
VPS29-211ENST00000553128 GVINP1Q7Z2Y8 2422 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms