RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TBX3O15119 743 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 B4GALT4O60513 344 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 PSAPP07602 524 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 GNAT1P11488 350 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 PDCP20941 246 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
PTCH1-225ENST00000551845 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
PTCH1-225ENST00000551845 PTGISQ16647 500 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 LRCH2Q5VUJ6 765 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 FAM160B1Q5W0V3 765 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 SWSAP1Q6NVH7 229 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 ABHD15Q6UXT9 468 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 SH3RF1Q7Z6J0 888 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 NOSTRINQ8IVI9 506 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 BADQ92934 168 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 TRIM43Q96BQ3 446 aaPredicted RBP12□□□□□ -0.49
PTCH1-225ENST00000551845 TRMT13Q9NUP7 481 aaKnown RBP12□□□□□ -0.49
PTCH1-225ENST00000551845 NOL7Q9UMY1 257 aaKnown RBP12□□□□□ -0.49
PTCH1-225ENST00000551845 TELO2Q9Y4R8 837 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 SAMM50Q9Y512 469 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 PCDHA10Q9Y5I2 948 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 LCTP09848 1927 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 MCM3APO60318 1980 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 KIAA0355O15063 1070 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 LGR5O75473 907 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 PSMD10O75832 226 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 CCNE2O96020 404 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 TIMP1P01033 207 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 HSP90AA1P07900 732 aaKnown RBP11.99□□□□□ -0.49
PTCH1-225ENST00000551845 SFNP31947 248 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 TRAPPC10P48553 1259 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 SLC26A2P50443 739 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 SLFN12Q8IYM2 578 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 PPP1R13LQ8WUF5 828 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 RNPEPQ9H4A4 650 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 ZNF302Q9NR11 478 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 PDLIM7Q9NR12 457 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 DISC1Q9NRI5 854 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 GTF2IRD1Q9UHL9 959 aa11.99□□□□□ -0.49
PTCH1-225ENST00000551845 EMSYQ7Z589 1322 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 NRCAMQ92823 1304 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 IGKV6D-21A0A0A0MT36 114 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 WDR64B1ANS9 1081 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 SLC37A4O43826 429 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 SMIM10L2AP0DMW4 78 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 SMIM10L2BP0DMW5 78 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 JAK3P52333 1124 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 GDF6Q6KF10 455 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-225ENST00000551845 RETREG2Q8NC44 543 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 ETNPPLQ8TBG4 499 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 GJA10Q969M2 543 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 FAM122AQ96E09 287 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 PCYT2Q99447 389 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 KCNMB3Q9NPA1 279 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 SETD4Q9NVD3 440 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 TBX21Q9UL17 535 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 PCDHA12Q9UN75 941 aa11.98□□□□□ -0.49
PTCH1-225ENST00000551845 RRN3P2A6NIE6 340 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 KIF28PB7ZC32 967 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 CHMP2AO43633 222 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 CYP2C9P11712 490 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 PDIA4P13667 645 aaKnown RBP11.97□□□□□ -0.49
PTCH1-225ENST00000551845 MARK3P27448 753 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 MCM7P33993 719 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 ORC2Q13416 577 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-225ENST00000551845 BFSP2Q13515 415 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 ZNF174Q15697 407 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 CALCRLQ16602 461 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 MFSD5Q6N075 450 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 PDXDC2PQ6P474 469 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 MIER3Q7Z3K6 550 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 TRIM50Q86XT4 487 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 CKAP2LQ8IYA6 745 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 TMEM199Q8N511 208 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 USP38Q8NB14 1042 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 RDM1Q8NG50 284 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 AFAP1L1Q8TED9 768 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 PPM1EQ8WY54 764 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 HAS1Q92839 578 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 ATP6V0A1Q93050 837 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 RNPC3Q96LT9 517 aaKnown RBP11.97□□□□□ -0.49
PTCH1-225ENST00000551845 HIPK3Q9H422 1215 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 NRBP2Q9NSY0 501 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 GABBR1Q9UBS5 961 aa11.97□□□□□ -0.49
PTCH1-225ENST00000551845 MAFBQ9Y5Q3 323 aaPredicted RBP11.97□□□□□ -0.49
PTCH1-225ENST00000551845 POTEB3A0JP26 581 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 HBP1O60381 514 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 NEMFO60524 1076 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 INSRRP14616 1297 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 PLA2G5P39877 138 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 TXKP42681 527 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 ZNF200P98182 395 aaPredicted RBP11.96□□□□□ -0.49
PTCH1-225ENST00000551845 PPFIA1Q13136 1202 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 PTK7Q13308 1070 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 PLCB4Q15147 1175 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 RILPL1Q5EBL4 403 aa11.96□□□□□ -0.49
PTCH1-225ENST00000551845 TTC38Q5R3I4 469 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms