RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 H7C1D1 291 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 CAND2O75155 1236 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 SNUPNO95149 360 aaKnown RBP6.9□□□□□ -1.3
CPSF6-206ENST00000550987 KRT18P05783 430 aaKnown RBP6.9□□□□□ -1.3
CPSF6-206ENST00000550987 CEACAM5P06731 702 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 GNAT1P11488 350 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 ZSCAN20P17040 1043 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-206ENST00000550987 CTCFP49711 727 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-206ENST00000550987 SESN3P58005 492 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 SPIRE1Q08AE8 756 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 NFIAQ12857 509 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 ZNF174Q15697 407 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 DDB1Q16531 1140 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 ZPBP2Q6X784 338 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 PRR23CQ6ZRP0 262 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 BRINP3Q76B58 766 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 C14orf80Q86SX3 495 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 OSTM1Q86WC4 334 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 SPACA3Q8IXA5 215 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 USP33Q8TEY7 942 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 TRMT2BQ96GJ1 504 aaKnown RBP6.9□□□□□ -1.3
CPSF6-206ENST00000550987 DBNDD2Q9BQY9 259 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-206ENST00000550987 PDGFDQ9GZP0 370 aaPredicted RBP6.9□□□□□ -1.3
CPSF6-206ENST00000550987 PPARGC1AQ9UBK2 798 aaKnown RBP6.9□□□□□ -1.3
CPSF6-206ENST00000550987 IP6K2Q9UHH9 426 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 TNKSO95271 1327 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 WASHC2AQ641Q2 1341 aa6.9□□□□□ -1.3
CPSF6-206ENST00000550987 COL6A3P12111 3177 aa6.9□□□□□ -1.31
CPSF6-206ENST00000550987 MLH3Q9UHC1 1453 aa6.9□□□□□ -1.31
CPSF6-206ENST00000550987 TMEM131LA2VDJ0 1609 aa6.9□□□□□ -1.31
CPSF6-206ENST00000550987 CICQ96RK0 1608 aaPredicted RBP6.9□□□□□ -1.31
CPSF6-206ENST00000550987 TMEM265A0A087WTH1 108 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 A0A1W2PQ27 194 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 A0A1W2PQ64 194 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 A0A1W2PQC6 194 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 A0A1W2PQD8 194 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 WTIPA6NIX2 430 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-206ENST00000550987 WNT9AO14904 365 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 CYP26A1O43174 497 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 CHRNA4P43681 627 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 RBM10P98175 930 aaKnown RBP6.89□□□□□ -1.31
CPSF6-206ENST00000550987 INSM1Q01101 510 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-206ENST00000550987 ABCB5Q2M3G0 1257 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 GAB4Q2WGN9 574 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 MBLAC2Q68D91 279 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 PGM2L1Q6PCE3 622 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 CD163Q86VB7 1156 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 LUC7LQ9NQ29 371 aaKnown RBP6.89□□□□□ -1.31
CPSF6-206ENST00000550987 OXSMQ9NWU1 459 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 CBLCQ9ULV8 474 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 COA3Q9Y2R0 106 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-206ENST00000550987 LUC7L2Q9Y383 392 aaKnown RBP6.89□□□□□ -1.31
CPSF6-206ENST00000550987 ABCC5O15440 1437 aa6.89□□□□□ -1.31
CPSF6-206ENST00000550987 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.89□□□□□ -1.31
CPSF6-206ENST00000550987 TET3O43151 1660 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 FMN1Q68DA7 1419 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 SLC12A8A0AV02 714 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 H7BY64 318 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 PLIN1O60240 522 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 MT-CO1P00395 513 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 PDE6AP16499 860 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 MECP2P51608 486 aaKnown RBP6.88□□□□□ -1.31
CPSF6-206ENST00000550987 IFI16Q16666 785 aaKnown RBP6.88□□□□□ -1.31
CPSF6-206ENST00000550987 BROXQ5VW32 411 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 PPP4R4Q6NUP7 873 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 PNMA8AQ86V59 439 aaPredicted RBP6.88□□□□□ -1.31
CPSF6-206ENST00000550987 SHKBP1Q8TBC3 707 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 NETO1Q8TDF5 533 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 JPH3Q8WXH2 748 aaPredicted RBP6.88□□□□□ -1.31
CPSF6-206ENST00000550987 SLC5A5Q92911 643 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 FUBP3Q96I24 572 aaKnown RBP eCLIP6.88□□□□□ -1.31
CPSF6-206ENST00000550987 CDH19Q9H159 772 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 ATP13A1Q9HD20 1204 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 PLAGL2Q9UPG8 496 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 NOC2LQ9Y3T9 749 aaKnown RBP6.88□□□□□ -1.31
CPSF6-206ENST00000550987 SNX11Q9Y5W9 270 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 MRFAP1Q9Y605 127 aa6.88□□□□□ -1.31
CPSF6-206ENST00000550987 EHBP1L1Q8N3D4 1523 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 GSC2O15499 205 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 TPD52L2O43399 206 aaKnown RBP6.87□□□□□ -1.31
CPSF6-206ENST00000550987 DGKIO75912 1065 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 CFBP00751 764 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 FUCA1P04066 466 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 COL6A2P12110 1019 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 YBX3P16989 372 aaKnown RBP eCLIP6.87□□□□□ -1.31
CPSF6-206ENST00000550987 GRIK1P39086 918 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 LBX1P52954 281 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 LACTBP83111 547 aaPredicted RBP6.87□□□□□ -1.31
CPSF6-206ENST00000550987 KLF1Q13351 362 aaPredicted RBP6.87□□□□□ -1.31
CPSF6-206ENST00000550987 MLC1Q15049 377 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 GPR19Q15760 415 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 SLC4A10Q6U841 1118 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 ARHGAP36Q6ZRI8 547 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 CERS3Q8IU89 383 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 PLD6Q8N2A8 252 aaKnown RBP6.87□□□□□ -1.31
CPSF6-206ENST00000550987 AFAP1Q8N556 730 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 EFHBQ8N7U6 833 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 BOCQ9BWV1 1114 aa6.87□□□□□ -1.31
CPSF6-206ENST00000550987 PCIF1Q9H4Z3 704 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms