RNA–Protein interactions for RNA: ENST00000550390.1

EIF4B-209, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 5

Gene EIF4B, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-209ENST00000550390 TRIM29Q14134 588 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 MCTP1Q6DN14 999 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 CCDC62Q6P9F0 684 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 ARMCX2Q7L311 632 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 DEFB128Q7Z7B8 93 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 NOSTRINQ8IVI9 506 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 MSL3Q8N5Y2 521 aaKnown RBP9.76□□□□□ -0.85
EIF4B-209ENST00000550390 SLC43A3Q8NBI5 491 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 BICD2Q8TD16 824 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 GJA10Q969M2 543 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 IWS1Q96ST2 819 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 WDR11Q9BZH6 1224 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 ADD3Q9UEY8 706 aaKnown RBP9.76□□□□□ -0.85
EIF4B-209ENST00000550390 MRVI1Q9Y6F6 885 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 NLRC5Q86WI3 1866 aa9.76□□□□□ -0.85
EIF4B-209ENST00000550390 RBM47A0AV96 593 aaKnown RBP9.75□□□□□ -0.85
EIF4B-209ENST00000550390 PRR33A8MZF0 331 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 SPATA31C2B4DYI2 1134 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 LPXNO60711 386 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 ARIH2O95376 493 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 CYP2C9P11712 490 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 ATP2B1P20020 1258 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 ITGA7Q13683 1181 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 NONOQ15233 471 aaKnown RBP eCLIP9.75□□□□□ -0.85
EIF4B-209ENST00000550390 IL17AQ16552 155 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 PCNX4Q63HM2 1172 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 KRT25Q7Z3Z0 450 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 TLK2Q86UE8 772 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 PPP1R13LQ8WUF5 828 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 MXRA8Q9BRK3 442 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 FTOQ9C0B1 505 aaKnown RBP eCLIP9.75□□□□□ -0.85
EIF4B-209ENST00000550390 TMEM60Q9H2L4 133 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 JADE2Q9NQC1 790 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 TFIP11Q9UBB9 837 aaKnown RBP9.75□□□□□ -0.85
EIF4B-209ENST00000550390 KIF3AQ9Y496 699 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 PCDHB6Q9Y5E3 794 aa9.75□□□□□ -0.85
EIF4B-209ENST00000550390 CCDC194A0A1B0GVG4 234 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 LCHNA4D1U4 455 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 ASB14A6NK59 587 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 DHX15O43143 795 aaKnown RBP9.74□□□□□ -0.85
EIF4B-209ENST00000550390 SLC37A4O43826 429 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 F13A1P00488 732 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 SAFBQ15424 915 aaKnown RBP eCLIP9.74□□□□□ -0.85
EIF4B-209ENST00000550390 ZNF174Q15697 407 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 STXBP2Q15833 593 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 CEP55Q53EZ4 464 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 MYSM1Q5VVJ2 828 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 MCTP2Q6DN12 878 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 SEPT14Q6ZU15 432 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 FBXO16Q8IX29 292 aaPredicted RBP9.74□□□□□ -0.85
EIF4B-209ENST00000550390 HAS1Q92839 578 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 COPS5Q92905 334 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 FBXL18Q96ME1 805 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 INPP4AQ96PE3 977 aaPredicted RBP9.74□□□□□ -0.85
EIF4B-209ENST00000550390 ABHD16BQ9H3Z7 469 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 TRMT13Q9NUP7 481 aaKnown RBP9.74□□□□□ -0.85
EIF4B-209ENST00000550390 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
EIF4B-209ENST00000550390 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
EIF4B-209ENST00000550390 KMT2EQ8IZD2 1858 aa9.74□□□□□ -0.85
EIF4B-209ENST00000550390 LOC102724159A0A0B4J2E5 919 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 IL9P15248 144 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 SMPD1P17405 629 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 CCND2P30279 289 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 ICAM3P32942 547 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 TNFAIP2Q03169 654 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 PDE4DQ08499 809 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 ITGB3BPQ13352 177 aaPredicted RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 PTPAQ15257 358 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 PWP2Q15269 919 aaKnown RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 FSCN1Q16658 493 aaKnown RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 LY6KQ17RY6 165 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 LETM2Q2VYF4 491 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 FOXD4L6Q3SYB3 417 aaPredicted RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 PPP4R3AQ6IN85 833 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 XRRA1Q6P2D8 792 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 FOXD4L3Q6VB84 417 aaPredicted RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 TMCO2Q7Z6W1 182 aaPredicted RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 NEK8Q86SG6 692 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 RPUSD2Q8IZ73 545 aaKnown RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 MTMR9Q96QG7 549 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 USP28Q96RU2 1077 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 SLC9A7Q96T83 725 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 PHOX2BQ99453 314 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 UBE2ZQ9H832 354 aaPredicted RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 KCNH7Q9NS40 1196 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 GNEQ9Y223 722 aaKnown RBP9.73□□□□□ -0.85
EIF4B-209ENST00000550390 CLIC4Q9Y696 253 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 MICAL3Q7RTP6 2002 aa9.73□□□□□ -0.85
EIF4B-209ENST00000550390 MSH4O15457 936 aa9.72□□□□□ -0.85
EIF4B-209ENST00000550390 CCNT1O60563 726 aaKnown RBP9.72□□□□□ -0.85
EIF4B-209ENST00000550390 KCNA2P16389 499 aa9.72□□□□□ -0.85
EIF4B-209ENST00000550390 SSTR3P32745 418 aaPredicted RBP9.72□□□□□ -0.85
EIF4B-209ENST00000550390 NKX3-2P78367 333 aa9.72□□□□□ -0.85
EIF4B-209ENST00000550390 Q4G0T1 1027 aa9.72□□□□□ -0.85
EIF4B-209ENST00000550390 PRR16Q569H4 304 aa9.72□□□□□ -0.85
EIF4B-209ENST00000550390 IQSEC1Q6DN90 963 aa9.72□□□□□ -0.85
EIF4B-209ENST00000550390 PLA2G4DQ86XP0 818 aa9.72□□□□□ -0.85
EIF4B-209ENST00000550390 HERC6Q8IVU3 1022 aa9.72□□□□□ -0.85
EIF4B-209ENST00000550390 GJD3Q8N144 294 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms