RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 TMEM199Q8N511 208 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 RDM1Q8NG50 284 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 LMBR1Q8WVP7 490 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 HAS1Q92839 578 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 NAP1L4Q99733 375 aaKnown RBP12.39□□□□□ -0.43
GCN1-202ENST00000547263 PPP1R12CQ9BZL4 782 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 FOXP1Q9H334 677 aaPredicted RBP12.39□□□□□ -0.43
GCN1-202ENST00000547263 IL23AQ9NPF7 189 aa12.39□□□□□ -0.43
GCN1-202ENST00000547263 C17orf102A2RUQ5 167 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 WNT7AO00755 349 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 TREHO43280 583 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 PARNO95453 639 aaKnown RBP12.38□□□□□ -0.43
GCN1-202ENST00000547263 PFKMP08237 780 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 CKBP12277 381 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 U2AF2P26368 475 aaKnown RBP eCLIP12.38□□□□□ -0.43
GCN1-202ENST00000547263 STAT5BP51692 787 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 SP4Q02446 784 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 SPIRE1Q08AE8 756 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
GCN1-202ENST00000547263 BFSP2Q13515 415 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 PLCB4Q15147 1175 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 SHHQ15465 462 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 FAM26DQ5JW98 314 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 UTP14CQ5TAP6 766 aaKnown RBP12.38□□□□□ -0.43
GCN1-202ENST00000547263 PIK3AP1Q6ZUJ8 805 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 C8orf76Q96K31 380 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 FAM20AQ96MK3 541 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.436e-8■□□□□ 11
GCN1-202ENST00000547263 BRMS1Q9HCU9 246 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
GCN1-202ENST00000547263 VAV3Q9UKW4 847 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 PCDHA10Q9Y5I2 948 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 PTPRSQ13332 1948 aa12.38□□□□□ -0.43
GCN1-202ENST00000547263 WDR64B1ANS9 1081 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 ZBTB42B2RXF5 422 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 SOX1O00570 391 aaPredicted RBP12.37□□□□□ -0.43
GCN1-202ENST00000547263 GNAT1P11488 350 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 SELPP16109 830 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 SFNP31947 248 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 MBTPS1Q14703 1052 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 PSRC1Q6PGN9 363 aaPredicted RBP12.37□□□□□ -0.43
GCN1-202ENST00000547263 CCDC155Q8N6L0 562 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 ATP8B4Q8TF62 1192 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 HERVK_113Q902F9 699 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 UNC45AQ9H3U1 944 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 SETD4Q9NVD3 440 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 COL1A2P08123 1366 aa12.37□□□□□ -0.43
GCN1-202ENST00000547263 RRN3P2A6NIE6 340 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 ZNF862O60290 1169 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 HBP1O60381 514 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 STBD1O95210 358 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 INSRRP14616 1297 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 JAK3P52333 1124 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 CCL23P55773 120 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 MGAT3Q09327 533 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 ORC2Q13416 577 aaPredicted RBP12.36□□□□□ -0.43
GCN1-202ENST00000547263 TRIM29Q14134 588 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 GRIK4Q16099 956 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 LETM2Q2VYF4 491 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 LRCH2Q5VUJ6 765 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 MIS18BP1Q6P0N0 1132 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 TAF2Q6P1X5 1199 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 LRRC8DQ7L1W4 858 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 LINC01465Q8N7H1 131 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 GLG1Q92896 1179 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 ATP6V0A1Q93050 837 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 SNX21Q969T3 373 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 SCLYQ96I15 445 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 MTMR9Q96QG7 549 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 CEP89Q96ST8 783 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 TEKT3Q9BXF9 490 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 AZI2Q9H6S1 392 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 ZNF302Q9NR11 478 aa12.36□□□□□ -0.43
GCN1-202ENST00000547263 MICAL3Q7RTP6 2002 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 POTEB3A0JP26 581 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 KIF28PB7ZC32 967 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 DDX39AO00148 427 aaKnown RBP12.35□□□□□ -0.43
GCN1-202ENST00000547263 GAS7O60861 476 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 NBNO60934 754 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 RPLP2P05387 115 aaKnown RBP12.35□□□□□ -0.43
GCN1-202ENST00000547263 PSAPP07602 524 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 PPFIA1Q13136 1202 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 TARBP2Q15633 366 aaKnown RBP12.35□□□□□ -0.43
GCN1-202ENST00000547263 ZNF618Q5T7W0 954 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 SWSAP1Q6NVH7 229 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 POTEBQ6S5H4 581 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 ZNF365Q70YC5 407 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 POTEDQ86YR6 584 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 RPUSD2Q8IZ73 545 aaKnown RBP12.35□□□□□ -0.43
GCN1-202ENST00000547263 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
GCN1-202ENST00000547263 TNPO1Q92973 898 aaKnown RBP12.35□□□□□ -0.43
GCN1-202ENST00000547263 GJA10Q969M2 543 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 GBF1Q92538 1859 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 LAMA3Q16787 3333 aa12.35□□□□□ -0.43
GCN1-202ENST00000547263 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 EVPLQ92817 2033 aa12.34□□□□□ -0.43
GCN1-202ENST00000547263 SMIM35A0A1B0GVV1 85 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms