RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ABHD15Q6UXT9 468 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 MICAL3Q7RTP6 2002 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 SMAP1Q8IYB5 467 aaPredicted RBP18.02■□□□□ 0.48
DDX54-204ENST00000546898 IL27Q8NEV9 243 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 FTOQ9C0B1 505 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDX54-204ENST00000546898 CXXC1Q9P0U4 656 aaPredicted RBP18.02■□□□□ 0.48
DDX54-204ENST00000546898 CYP3A7-CYP3A51PA0A087WV96 503 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 CCDC194A0A1B0GVG4 234 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 RRN3P2A6NIE6 340 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 ZBBXA8MT70 800 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 EDIL3O43854 480 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 RPLP2P05387 115 aaKnown RBP18.01■□□□□ 0.47
DDX54-204ENST00000546898 CYP3A7P24462 503 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 THPOP40225 353 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 GRIK4Q16099 956 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 Q4G0T1 1027 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 MIS18BP1Q6P0N0 1132 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 TAF2Q6P1X5 1199 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 TRAF7Q6Q0C0 670 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 Q7L0L9 218 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 ZSCAN31Q96LW9 406 aaPredicted RBP18.01■□□□□ 0.47
DDX54-204ENST00000546898 BRMS1Q9HCU9 246 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 TUBE1Q9UJT0 475 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 TRPC6Q9Y210 931 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 SLC4A7Q9Y6M7 1214 aa18.01■□□□□ 0.47
DDX54-204ENST00000546898 LAMA2P24043 3122 aaKnown RBP18■□□□□ 0.47
DDX54-204ENST00000546898 MBLAC1A4D2B0 266 aaPredicted RBP18■□□□□ 0.47
DDX54-204ENST00000546898 RSPH10B2B2RC85 870 aa18■□□□□ 0.47
DDX54-204ENST00000546898 BACH1O14867 736 aa18■□□□□ 0.47
DDX54-204ENST00000546898 MSH4O15457 936 aa18■□□□□ 0.47
DDX54-204ENST00000546898 RSPH10BP0C881 870 aa18■□□□□ 0.47
DDX54-204ENST00000546898 DNAJB2P25686 324 aa18■□□□□ 0.47
DDX54-204ENST00000546898 PLCB4Q15147 1175 aa18■□□□□ 0.47
DDX54-204ENST00000546898 RAB30Q15771 203 aa18■□□□□ 0.47
DDX54-204ENST00000546898 CNKSR3Q6P9H4 555 aa18■□□□□ 0.47
DDX54-204ENST00000546898 RPAINQ86UA6 219 aa18■□□□□ 0.47
DDX54-204ENST00000546898 CCDC60Q8IWA6 550 aaPredicted RBP18■□□□□ 0.47
DDX54-204ENST00000546898 MBOAT7Q96N66 472 aa18■□□□□ 0.47
DDX54-204ENST00000546898 SLC9A7Q96T83 725 aa18■□□□□ 0.47
DDX54-204ENST00000546898 RIT2Q99578 217 aa18■□□□□ 0.47
DDX54-204ENST00000546898 ZNF302Q9NR11 478 aa18■□□□□ 0.47
DDX54-204ENST00000546898 MTMR10Q9NXD2 777 aa18■□□□□ 0.47
DDX54-204ENST00000546898 NBNO60934 754 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 INSRRP14616 1297 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 KRT2P35908 639 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 ST3GAL1Q11201 340 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 GPNMBQ14956 572 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 RABEP1Q15276 862 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 INF2Q27J81 1249 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 SLC5A5Q92911 643 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 NAP1L4Q99733 375 aaKnown RBP17.99■□□□□ 0.47
DDX54-204ENST00000546898 LLPHQ9BRT6 129 aaKnown RBP17.99■□□□□ 0.47
DDX54-204ENST00000546898 PBX4Q9BYU1 374 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 SH2B1Q9NRF2 756 aaPredicted RBP17.99■□□□□ 0.47
DDX54-204ENST00000546898 PCDHA10Q9Y5I2 948 aa17.99■□□□□ 0.47
DDX54-204ENST00000546898 LOXHD1Q8IVV2 1947 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 EVPLQ92817 2033 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 POTEB3A0JP26 581 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 WDR64B1ANS9 1081 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 JAK2O60674 1132 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 GAS7O60861 476 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 EFCAB14O75071 495 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 TDP2O95551 362 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 PSAPP07602 524 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 GCFC2P16383 781 aaKnown RBP17.98■□□□□ 0.47
DDX54-204ENST00000546898 TRIM29Q14134 588 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 MBTPS1Q14703 1052 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 FAM26DQ5JW98 314 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 LRCH2Q5VUJ6 765 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 POTEBQ6S5H4 581 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 NEK8Q86SG6 692 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 RSPH3Q86UC2 560 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 PHOSPHO2Q8TCD6 241 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 ATP8B4Q8TF62 1192 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 TEKT3Q9BXF9 490 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 GJB4Q9NTQ9 266 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 MSRAQ9UJ68 235 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 COL1A2P08123 1366 aa17.98■□□□□ 0.47
DDX54-204ENST00000546898 GRXCR1A8MXD5 290 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 HBP1O60381 514 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 DTNBO60941 627 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 MMP1P03956 469 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 ATP2A2P16615 1042 aaKnown RBP17.97■□□□□ 0.47
DDX54-204ENST00000546898 SFNP31947 248 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 KCNJ6P48051 423 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 JAK3P52333 1124 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 MARCH8Q5T0T0 291 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 PPP4R3AQ6IN85 833 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 SWSAP1Q6NVH7 229 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 PDXDC2PQ6P474 469 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 CCDC83Q8IWF9 413 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 OXER1Q8TDS5 423 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 TIFAQ96CG3 184 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 UIMC1Q96RL1 719 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 DDX25Q9UHL0 483 aaKnown RBP17.97■□□□□ 0.47
DDX54-204ENST00000546898 MAFBQ9Y5Q3 323 aaPredicted RBP17.97■□□□□ 0.47
DDX54-204ENST00000546898 IGSF9BQ9UPX0 1349 aa17.97■□□□□ 0.47
DDX54-204ENST00000546898 ABHD14A-ACY1A0A1B0GW23 586 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 ST18O60284 1047 aa17.96■□□□□ 0.47
DDX54-204ENST00000546898 PSMD10O75832 226 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms