RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 UTP14CQ5TAP6 766 aaKnown RBP17.41■□□□□ 0.38
SSH1-204ENST00000546697 CNKSR3Q6P9H4 555 aa17.41■□□□□ 0.38
SSH1-204ENST00000546697 FAM43BQ6ZT52 329 aaPredicted RBP17.41■□□□□ 0.38
SSH1-204ENST00000546697 OTOP2Q7RTS6 562 aa17.41■□□□□ 0.38
SSH1-204ENST00000546697 SMAP1Q8IYB5 467 aaPredicted RBP17.41■□□□□ 0.38
SSH1-204ENST00000546697 TNPO1Q92973 898 aaKnown RBP17.41■□□□□ 0.38
SSH1-204ENST00000546697 SLC9A7Q96T83 725 aa17.41■□□□□ 0.38
SSH1-204ENST00000546697 RIT2Q99578 217 aa17.41■□□□□ 0.38
SSH1-204ENST00000546697 EYSQ5T1H1 3165 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 EFCAB14O75071 495 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 ZNF76P36508 570 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 STAT5BP51692 787 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 KRT76Q01546 638 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 ST3GAL1Q11201 340 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 RAB30Q15771 203 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 NSUN7Q8NE18 718 aaKnown RBP17.4■□□□□ 0.38
SSH1-204ENST00000546697 TBCKQ8TEA7 893 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 WASF1Q92558 559 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 SLC5A5Q92911 643 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 PCDHA11Q9Y5I1 949 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 MAFBQ9Y5Q3 323 aaPredicted RBP17.4■□□□□ 0.38
SSH1-204ENST00000546697 SLC4A7Q9Y6M7 1214 aa17.4■□□□□ 0.38
SSH1-204ENST00000546697 ABHD14A-ACY1A0A1B0GW23 586 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 RSPH10B2B2RC85 870 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 MSH4O15457 936 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 RSPH10BP0C881 870 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 XBP1P17861 261 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 CHMP4BP1P59074 171 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 SP4Q02446 784 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 PPFIA1Q13136 1202 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 PLCB4Q15147 1175 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 GRIK4Q16099 956 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 PLEKHG4Q58EX7 1191 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 KRT25Q7Z3Z0 450 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 DEFB128Q7Z7B8 93 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 GLG1Q92896 1179 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 TNFRSF25Q93038 417 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 ZNF577Q9BSK1 485 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 AZI2Q9H6S1 392 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 PKD2L1Q9P0L9 805 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 COL1A2P08123 1366 aa17.39■□□□□ 0.37
SSH1-204ENST00000546697 MGAT3Q09327 533 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 PRR16Q569H4 304 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 PPP4R3AQ6IN85 833 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 CCDC60Q8IWA6 550 aaPredicted RBP17.38■□□□□ 0.37
SSH1-204ENST00000546697 RDM1Q8NG50 284 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 TIFAQ96CG3 184 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 ORC3Q9UBD5 711 aaPredicted RBP17.38■□□□□ 0.37
SSH1-204ENST00000546697 TUBE1Q9UJT0 475 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 LIMCH1Q9UPQ0 1083 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 SQORQ9Y6N5 450 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 KAT6AQ92794 2004 aa17.38■□□□□ 0.37
SSH1-204ENST00000546697 PTPRSQ13332 1948 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 COL4A6Q14031 1691 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 HBP1O60381 514 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 PSMD10O75832 226 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 INSRRP14616 1297 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 ATP2A2P16615 1042 aaKnown RBP17.37■□□□□ 0.37
SSH1-204ENST00000546697 ATP4AP20648 1035 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 THPOP40225 353 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 NONOQ15233 471 aaKnown RBP eCLIP17.37■□□□□ 0.37
SSH1-204ENST00000546697 TCTN1Q2MV58 587 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 ETNPPLQ8TBG4 499 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 ATP8B4Q8TF62 1192 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 LLPHQ9BRT6 129 aaKnown RBP17.37■□□□□ 0.37
SSH1-204ENST00000546697 PCDHA2Q9Y5H9 948 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 PCDHA10Q9Y5I2 948 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 IGSF9BQ9UPX0 1349 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 GBF1Q92538 1859 aa17.37■□□□□ 0.37
SSH1-204ENST00000546697 SIP14410 1827 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 GRXCR1A8MXD5 290 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 ZBTB42B2RXF5 422 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 GCFC2P16383 781 aaKnown RBP17.36■□□□□ 0.37
SSH1-204ENST00000546697 PBX2P40425 430 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 WDR5P61964 334 aaKnown RBP17.36■□□□□ 0.37
SSH1-204ENST00000546697 FAM160B1Q5W0V3 765 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 MIS18BP1Q6P0N0 1132 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 NECAB1Q8N987 351 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 ZNF576Q9H609 170 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 KCNMB3Q9NPA1 279 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 KCNJ14Q9UNX9 436 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 KDM3AQ9Y4C1 1321 aa17.36■□□□□ 0.37
SSH1-204ENST00000546697 A0A0C4DFX4 3053 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 SMIM35A0A1B0GVV1 85 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 POTEB3A0JP26 581 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 WDR64B1ANS9 1081 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 TBX3O15119 743 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 CHRNA1P02708 482 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 MARK3P27448 753 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 SFNP31947 248 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 POTEBQ6S5H4 581 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 RUFY4Q6ZNE9 571 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 HERC6Q8IVU3 1022 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 NME8Q8N427 588 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 BBXQ8WY36 941 aaPredicted RBP17.35■□□□□ 0.37
SSH1-204ENST00000546697 APBB2Q92870 758 aa17.35■□□□□ 0.37
SSH1-204ENST00000546697 ZSCAN31Q96LW9 406 aaPredicted RBP17.35■□□□□ 0.37
SSH1-204ENST00000546697 CDX2Q99626 313 aaPredicted RBP17.35■□□□□ 0.37
SSH1-204ENST00000546697 FTOQ9C0B1 505 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSH1-204ENST00000546697 ZNF302Q9NR11 478 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms