RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 A1CFQ9NQ94 594 aaKnown RBP13.26□□□□□ -0.29
CCDC38-202ENST00000546386 ADARB2Q9NS39 739 aaKnown RBP13.26□□□□□ -0.29
CCDC38-202ENST00000546386 BTBD7Q9P203 1132 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 ATAD5Q96QE3 1844 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 CIITAP33076 1130 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 HSD17B4P51659 736 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 CYP27A1Q02318 531 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 KCTD19Q17RG1 926 aaPredicted RBP13.26□□□□□ -0.29
CCDC38-202ENST00000546386 SUPT20HL1Q3ZLR7 823 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 MIIPQ5JXC2 388 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 MIER3Q7Z3K6 550 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 ANKRD35Q8N283 1001 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 ERMNQ8TAM6 284 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 ZNF668Q96K58 619 aaPredicted RBP13.26□□□□□ -0.29
CCDC38-202ENST00000546386 FAM20AQ96MK3 541 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 CUEDC2Q9H467 287 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 LIMA1Q9UHB6 759 aaKnown RBP13.26□□□□□ -0.29
CCDC38-202ENST00000546386 PCDHB13Q9Y5F0 798 aa13.26□□□□□ -0.29
CCDC38-202ENST00000546386 COL2A1P02458 1487 aaPredicted RBP13.25□□□□□ -0.29
CCDC38-202ENST00000546386 PPP1R12BO60237 982 aaPredicted RBP13.25□□□□□ -0.29
CCDC38-202ENST00000546386 CCNE2O96020 404 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 EPHX2P34913 555 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 SP2Q02086 613 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 CCDC40Q4G0X9 1142 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 DCAF17Q5H9S7 520 aaPredicted RBP13.25□□□□□ -0.29
CCDC38-202ENST00000546386 TCERG1LQ5VWI1 586 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 ANKRD20A12PQ8NF67 263 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 PDCD2LQ9BRP1 358 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 PCIF1Q9H4Z3 704 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 ZSWIM4Q9H7M6 989 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 TXNRD2Q9NNW7 524 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 PXMP2Q9NR77 195 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 TCEAL9Q9UHQ7 104 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 PPP2R2CQ9Y2T4 447 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 CSADQ9Y600 493 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 DHX15O43143 795 aaKnown RBP13.25□□□□□ -0.29
CCDC38-202ENST00000546386 RGS20O76081 388 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 NR3C2P08235 984 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 PBX1P40424 430 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 ADAM9Q13443 819 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 Q3C1V9 767 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 CENPPQ6IPU0 288 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 CCDC65Q8IXS2 484 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 ZBTB10Q96DT7 871 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 DHTKD1Q96HY7 919 aaPredicted RBP13.25□□□□□ -0.29
CCDC38-202ENST00000546386 WDR24Q96S15 920 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 PCDHA2Q9Y5H9 948 aa13.25□□□□□ -0.29
CCDC38-202ENST00000546386 ASTN1O14525 1302 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 MFAP3LO75121 409 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 LRRN2O75325 713 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 CYP3A4P08684 503 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 PNMA6AP0CW24 399 aaPredicted RBP13.24□□□□□ -0.29
CCDC38-202ENST00000546386 ACTN1P12814 892 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 DSG3P32926 999 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 MAP3K9P80192 1104 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 CATSPERGQ6ZRH7 1159 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 SYT2Q8N9I0 419 aaPredicted RBP13.24□□□□□ -0.29
CCDC38-202ENST00000546386 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 CDCA5Q96FF9 252 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 CTAGE1Q96RT6 745 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 TEKT3Q9BXF9 490 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 AS3MTQ9HBK9 375 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 ZNF112Q9UJU3 913 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 TBCAO75347 108 aaKnown RBP13.24□□□□□ -0.29
CCDC38-202ENST00000546386 NR2F2P24468 414 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 USP14P54578 494 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 EPC1Q9H2F5 836 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 ABHD10Q9NUJ1 306 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 DUSP10Q9Y6W6 482 aa13.24□□□□□ -0.29
CCDC38-202ENST00000546386 CYP2J2P51589 502 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 ODR4Q5SWX8 454 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 AGO4Q9HCK5 861 aaKnown RBP13.23□□□□□ -0.29
CCDC38-202ENST00000546386 PVALEFA0A1B0GWK0 134 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 LGALS16A8MUM7 142 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 FAM13AO94988 1023 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 GNG11P61952 73 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 EHHADHQ08426 723 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 LRRC55Q6ZSA7 311 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 CYFIP1Q7L576 1253 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 REXO1L1PQ8IX06 675 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 NDST4Q9H3R1 872 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 CYP39A1Q9NYL5 469 aa13.23□□□□□ -0.29
CCDC38-202ENST00000546386 DOCK5Q9H7D0 1870 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 CHMP4BP1P59074 171 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 SEMA3FQ13275 785 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 ORC2Q13416 577 aaPredicted RBP13.22□□□□□ -0.29
CCDC38-202ENST00000546386 SWSAP1Q6NVH7 229 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 GJB7Q6PEY0 223 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 ANKRD13CQ8N6S4 541 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 ZNF507Q8TCN5 953 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 OPTNQ96CV9 577 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 THAP9Q9H5L6 903 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 BICDL2A1A5D9 508 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 ARHGEF35A5YM69 484 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 HIP1RO75146 1068 aa13.22□□□□□ -0.29
CCDC38-202ENST00000546386 PTPROQ16827 1216 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms