RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 NLRX1Q86UT6 975 aa15.77■□□□□ 0.12
GCFC2-211ENST00000541687 ELOA2Q8IYF1 753 aaPredicted RBP15.77■□□□□ 0.12
GCFC2-211ENST00000541687 C7orf25Q9BPX7 421 aa15.77■□□□□ 0.12
GCFC2-211ENST00000541687 EXOC7Q9UPT5 735 aa15.77■□□□□ 0.12
GCFC2-211ENST00000541687 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.12
GCFC2-211ENST00000541687 IFNB1P01574 187 aa15.77■□□□□ 0.11
GCFC2-211ENST00000541687 FGGP02679 453 aa15.77■□□□□ 0.11
GCFC2-211ENST00000541687 TRIM49P0CI25 452 aa15.77■□□□□ 0.11
GCFC2-211ENST00000541687 TRIM49CP0CI26 452 aa15.77■□□□□ 0.11
GCFC2-211ENST00000541687 ZNF211Q13398 564 aaPredicted RBP15.77■□□□□ 0.11
GCFC2-211ENST00000541687 SNX1Q13596 522 aa15.77■□□□□ 0.11
GCFC2-211ENST00000541687 ZNF543Q08ER8 600 aa15.76■□□□□ 0.11
GCFC2-211ENST00000541687 CC2D2BQ6DHV5 1058 aa15.76■□□□□ 0.11
GCFC2-211ENST00000541687 PDXDC1Q6P996 788 aa15.76■□□□□ 0.11
GCFC2-211ENST00000541687 SH2D3CQ8N5H7 860 aa15.76■□□□□ 0.11
GCFC2-211ENST00000541687 TBX2Q13207 712 aaPredicted RBP15.76■□□□□ 0.11
GCFC2-211ENST00000541687 DHX36Q9H2U1 1008 aaKnown RBP15.76■□□□□ 0.11
GCFC2-211ENST00000541687 NOVA2Q9UNW9 492 aaKnown RBP15.76■□□□□ 0.11
GCFC2-211ENST00000541687 PDS5AQ29RF7 1337 aaKnown RBP15.76■□□□□ 0.11
GCFC2-211ENST00000541687 NAA25Q14CX7 972 aa15.76■□□□□ 0.11
GCFC2-211ENST00000541687 DNAJC17Q9NVM6 304 aaKnown RBP15.76■□□□□ 0.11
GCFC2-211ENST00000541687 NKIRAS1Q9NYS0 192 aa15.76■□□□□ 0.11
GCFC2-211ENST00000541687 DNAJC12Q9UKB3 198 aa15.76■□□□□ 0.11
GCFC2-211ENST00000541687 DAAM1Q9Y4D1 1078 aa15.76■□□□□ 0.11
GCFC2-211ENST00000541687 FER1L4A9Z1Z3 1794 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 NFAT5O94916 1531 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 TRIM66O15016 1216 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 SASH3O75995 380 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 STRN3Q13033 797 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 C6orf163Q5TEZ5 329 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 ZNF746Q6NUN9 644 aaPredicted RBP15.75■□□□□ 0.11
GCFC2-211ENST00000541687 TTI2Q6NXR4 508 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 EMBQ6PCB8 327 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 C16orf86Q6ZW13 317 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 PROM2Q8N271 834 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 BANK1Q8NDB2 785 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 POMGNT1Q8WZA1 660 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 IQCGQ9H095 443 aaKnown RBP15.75■□□□□ 0.11
GCFC2-211ENST00000541687 CCDC160A6NGH7 325 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 EIF2AK2P19525 551 aaKnown RBP15.75■□□□□ 0.11
GCFC2-211ENST00000541687 NR1D1P20393 614 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 LMNB1P20700 586 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 KNOP1Q1ED39 458 aaKnown RBP15.75■□□□□ 0.11
GCFC2-211ENST00000541687 ARHGEF16Q5VV41 709 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 CCDC97Q96F63 343 aaPredicted RBP15.75■□□□□ 0.11
GCFC2-211ENST00000541687 JCADQ9P266 1359 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 A6NNZ2 444 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 ATP2A1O14983 1001 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 ABL1P00519 1130 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 CD19P15391 556 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 TUBB8Q3ZCM7 444 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 NT5DC1Q5TFE4 455 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 DCUN1D2Q6PH85 259 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 DYDC2Q96IM9 177 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 NACC1Q96RE7 527 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 GINS2Q9Y248 185 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 BCL9O00512 1426 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 BEND6Q5SZJ8 279 aaPredicted RBP15.75■□□□□ 0.11
GCFC2-211ENST00000541687 GLYCTKQ8IVS8 523 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 PLAAQ9Y263 795 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.75■□□□□ 0.11
GCFC2-211ENST00000541687 CAPN6Q9Y6Q1 641 aa15.75■□□□□ 0.11
GCFC2-211ENST00000541687 PALM3A6NDB9 673 aaPredicted RBP15.74■□□□□ 0.11
GCFC2-211ENST00000541687 H3BQF6 201 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 ZBED4O75132 1171 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 NMT1P30419 496 aaKnown RBP15.74■□□□□ 0.11
GCFC2-211ENST00000541687 ARHGAP25P42331 645 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 IRX5P78411 483 aaPredicted RBP15.74■□□□□ 0.11
GCFC2-211ENST00000541687 DNAAF5Q86Y56 855 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 JMJD4Q9H9V9 463 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 AGTPBP1Q9UPW5 1226 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 PPFIA4O75335 1185 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 SLC9A1P19634 815 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 TMEM179Q6ZVK1 233 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 RBM12Q9NTZ6 932 aaKnown RBP15.74■□□□□ 0.11
GCFC2-211ENST00000541687 KBTBD4Q9NVX7 518 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 HNRNPDLO14979 420 aaKnown RBP15.74■□□□□ 0.11
GCFC2-211ENST00000541687 STAMBPO95630 424 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 GCLMP48507 274 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 TRIP13Q15645 432 aaPredicted RBP15.74■□□□□ 0.11
GCFC2-211ENST00000541687 GRIK5Q16478 980 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 ZNF653Q96CK0 615 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 RNF14Q9UBS8 474 aa15.74■□□□□ 0.11
GCFC2-211ENST00000541687 CYTH3O43739 400 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 CACNA2D3Q8IZS8 1091 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 PICK1Q9NRD5 415 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 CEP83Q9Y592 693 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 MYCNP04198 464 aaPredicted RBP15.73■□□□□ 0.11
GCFC2-211ENST00000541687 GAP43P17677 238 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 ADCY8P40145 1251 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 GRB10Q13322 594 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 KAZNQ674X7 775 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 MCTP2Q6DN12 878 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 BAIAP2L1Q9UHR4 511 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 SNX24Q9Y343 169 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 TACC3Q9Y6A5 838 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 PSMD14O00487 310 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 PDE6CP51160 858 aa15.73■□□□□ 0.11
GCFC2-211ENST00000541687 EZH2Q15910 746 aaKnown RBP15.73■□□□□ 0.11
GCFC2-211ENST00000541687 CCDC93Q567U6 631 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms