RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 B4E1Z4 1266 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 PPP1R11O60927 126 aaPredicted RBP13.54□□□□□ -0.24
UBC-209ENST00000541272 ITGB1P05556 798 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 GHRP10912 638 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 HOXB8P17481 243 aaPredicted RBP13.54□□□□□ -0.24
UBC-209ENST00000541272 SEC23AQ15436 765 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 IER5LQ5T953 404 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 UBALD2Q8IYN6 164 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 POF1BQ8WVV4 589 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 SEPT1Q8WYJ6 367 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 ALG13Q9NP73 1137 aaKnown RBP13.54□□□□□ -0.24
UBC-209ENST00000541272 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 PCDHB12Q9Y5F1 795 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 LAMA4Q16363 1823 aa13.54□□□□□ -0.24
UBC-209ENST00000541272 M0QZ92 97 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 HOXA13P31271 388 aaPredicted RBP13.53□□□□□ -0.24
UBC-209ENST00000541272 PTPN21Q16825 1174 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 STAG2Q8N3U4 1231 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 KLHL23Q8NBE8 558 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 IL31RAQ8NI17 732 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 NEK1Q96PY6 1258 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 OSBPL7Q9BZF2 842 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 IGFLR1Q9H665 355 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 USP15Q9Y4E8 981 aaPredicted RBP13.53□□□□□ -0.24
UBC-209ENST00000541272 TRIOO75962 3097 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 C5orf42Q9H799 3197 aa13.53□□□□□ -0.24
UBC-209ENST00000541272 CARNS1A5YM72 827 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 LINC01565O15544 149 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 SLC26A2P50443 739 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 MRPS6P82932 125 aaKnown RBP13.52□□□□□ -0.25
UBC-209ENST00000541272 PPFIA1Q13136 1202 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 SEMA3FQ13275 785 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 KCNC3Q14003 757 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 GRM4Q14833 912 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 CUL5Q93034 780 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 RIPOR3Q96MK2 946 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 MTA3Q9BTC8 594 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 TLE6Q9H808 572 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 C1orf112Q9NSG2 853 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 PCDHA2Q9Y5H9 948 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 MRPL42Q9Y6G3 142 aaKnown RBP13.52□□□□□ -0.25
UBC-209ENST00000541272 IGSF9BQ9UPX0 1349 aa13.52□□□□□ -0.25
UBC-209ENST00000541272 ATG2AQ2TAZ0 1938 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 KMT2EQ8IZD2 1858 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
UBC-209ENST00000541272 GLP2RO95838 553 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 SCG2P13521 617 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.25
UBC-209ENST00000541272 TCF7P36402 384 aaPredicted RBP13.51□□□□□ -0.25
UBC-209ENST00000541272 NBL1P41271 181 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 PLCB3Q01970 1234 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 TRDNQ13061 729 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 CLUL1Q15846 466 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 GRIK4Q16099 956 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 DUSP6Q16828 381 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 MARCH8Q5T0T0 291 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 FCHSD1Q86WN1 690 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 GPKOWQ92917 476 aaPredicted RBP eCLIP13.51□□□□□ -0.25
UBC-209ENST00000541272 NECTIN4Q96NY8 510 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 PHOX2BQ99453 314 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 TLR9Q9NR96 1032 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 CDY2AQ9Y6F7 541 aa13.51□□□□□ -0.25
UBC-209ENST00000541272 SMIM35A0A1B0GVV1 85 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 ERICH2A1L162 156 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 DNAJB1P25685 340 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 NRIP1P48552 1158 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 SARSP49591 514 aaKnown RBP13.5□□□□□ -0.25
UBC-209ENST00000541272 TROAPQ12815 778 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 SART3Q15020 963 aaKnown RBP13.5□□□□□ -0.25
UBC-209ENST00000541272 PLPPR4Q7Z2D5 763 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 RTN4RL1Q86UN2 441 aaPredicted RBP13.5□□□□□ -0.25
UBC-209ENST00000541272 DNAJB3Q8WWF6 145 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 ATOH1Q92858 354 aaPredicted RBP13.5□□□□□ -0.25
UBC-209ENST00000541272 LZTS2Q9BRK4 669 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 ELAC1Q9H777 363 aaKnown RBP13.5□□□□□ -0.25
UBC-209ENST00000541272 NGRNQ9NPE2 291 aaKnown RBP13.5□□□□□ -0.25
UBC-209ENST00000541272 PUF60Q9UHX1 559 aaKnown RBP13.5□□□□□ -0.25
UBC-209ENST00000541272 LRFN2Q9ULH4 789 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 TRPV2Q9Y5S1 764 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 KAT6AQ92794 2004 aa13.5□□□□□ -0.25
UBC-209ENST00000541272 FSCN2O14926 492 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 KCNA2P16389 499 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 ITIH3Q06033 890 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 PAK2Q13177 524 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 UTP14CQ5TAP6 766 aaKnown RBP13.49□□□□□ -0.25
UBC-209ENST00000541272 RUFY4Q6ZNE9 571 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 ADGRD2Q7Z7M1 963 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 SMARCC2Q8TAQ2 1214 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 RILPL2Q969X0 211 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 PIGSQ96S52 555 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 SPZ1Q9BXG8 430 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 CELF4Q9BZC1 486 aaKnown RBP13.49□□□□□ -0.25
UBC-209ENST00000541272 S1PR5Q9H228 398 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 BCAS3Q9H6U6 928 aa13.49□□□□□ -0.25
UBC-209ENST00000541272 AGO3Q9H9G7 860 aaKnown RBP13.49□□□□□ -0.25
UBC-209ENST00000541272 DIAPH3Q9NSV4 1193 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms