RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 L3MBTL3Q96JM7 780 aaPredicted RBP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 NT5C3AQ9H0P0 336 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 PIF1Q9H611 641 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 GGA1Q9UJY5 639 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 PCDHA12Q9UN75 941 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 DDX60LQ5H9U9 1706 aaKnown RBP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 hCG_2014768A0A024R1R8 64 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 RBAK-RBAKDNI3L0D1 243 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 SHOX2O60902 331 aaPredicted RBP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 LILRB3O75022 631 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 IL1R1P14778 569 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 EPS15P42566 896 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 POLR2FP61218 127 aaKnown RBP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 UBE2SQ16763 222 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 ZCWPW2Q504Y3 356 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 KLHDC7AQ5VTJ3 777 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 GBP6Q6ZN66 633 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 CCDC65Q8IXS2 484 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 IFT20Q8IY31 132 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 DNAJC19Q96DA6 116 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 CEP63Q96MT8 703 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 LSM14BQ9BX40 385 aaKnown RBP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 PLEKHA4Q9H4M7 779 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 RBM12Q9NTZ6 932 aaKnown RBP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 EHD2Q9NZN4 543 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 KDM3AQ9Y4C1 1321 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 SBF2Q86WG5 1849 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 GCFC2P16383 781 aaKnown RBP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 SKIDA1Q1XH10 827 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 TRAPPC3LQ5T215 181 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 SDE2Q6IQ49 451 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.98□□□□□ -1.13
KPNB1-203ENST00000540627 CAPS2Q9BXY5 557 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 TBC1D7Q9P0N9 293 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 ATP6V0A2Q9Y487 856 aa7.98□□□□□ -1.13
KPNB1-203ENST00000540627 PLIN4Q96Q06 1357 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 SPTLC1O15269 473 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 EDIL3O43854 480 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 TTLL1O95922 423 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 SNHG28P0DPA3 235 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 TNFRSF8P28908 595 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 MAGEA9P43362 315 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 DNA2P51530 1060 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 IRAK1P51617 712 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 ZNF543Q08ER8 600 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 PICALMQ13492 652 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 RAPGEF1Q13905 1077 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 ECM1Q16610 540 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 HERC4Q5GLZ8 1057 aaPredicted RBP7.97□□□□□ -1.13
KPNB1-203ENST00000540627 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
KPNB1-203ENST00000540627 AMIGO3Q86WK7 504 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 NELFCDQ8IXH7 590 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 ADGRF4Q8IZF3 695 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 TBC1D5Q92609 795 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 HAS1Q92839 578 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 CAVIN3Q969G5 261 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 NAP1L4Q99733 375 aaKnown RBP7.97□□□□□ -1.13
KPNB1-203ENST00000540627 FAM107BQ9H098 131 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 JMJD4Q9H9V9 463 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 PRKAG2Q9UGJ0 569 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 TNRC6CQ9HCJ0 1690 aaKnown RBP7.97□□□□□ -1.13
KPNB1-203ENST00000540627 CDK5RAP2Q96SN8 1893 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 GAKO14976 1311 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 ATP9BO43861 1147 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 TLR2O60603 784 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 PALMO75781 387 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 NOL4O94818 638 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 KRT18P05783 430 aaKnown RBP7.97□□□□□ -1.13
KPNB1-203ENST00000540627 AKR1B1P15121 316 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 NDUFV2P19404 249 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 CORO7P57737 925 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 ARID5AQ03989 594 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 KLHL30Q0D2K2 578 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 NNTQ13423 1086 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 ELOAQ14241 798 aaKnown RBP7.97□□□□□ -1.13
KPNB1-203ENST00000540627 NAB2Q15742 525 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.97□□□□□ -1.13
KPNB1-203ENST00000540627 TMC4Q7Z404 712 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 TRIM59Q8IWR1 403 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 MS4A14Q96JA4 679 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 SH3GL2Q99962 352 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 PSTPIP2Q9H939 334 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 KIAA1024Q9UPX6 916 aa7.97□□□□□ -1.13
KPNB1-203ENST00000540627 A6NNZ2 444 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 FTCDO95954 541 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 EPB41P11171 864 aaKnown RBP7.96□□□□□ -1.13
KPNB1-203ENST00000540627 PAK2Q13177 524 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 ENOX2Q16206 610 aaKnown RBP7.96□□□□□ -1.13
KPNB1-203ENST00000540627 SLC18A3Q16572 532 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 PTPROQ16827 1216 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 KIAA0753Q2KHM9 967 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 TUBB8Q3ZCM7 444 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 GPBP1Q86WP2 473 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 CLEC10AQ8IUN9 316 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 PPM1EQ8WY54 764 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 GJA10Q969M2 543 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 DAGLAQ9Y4D2 1042 aa7.96□□□□□ -1.13
KPNB1-203ENST00000540627 SHTN1A0MZ66 631 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms