RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 FKBP1AP62942 108 aaKnown RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 KCNH2Q12809 1159 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 ENOX2Q16206 610 aaKnown RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 SYT2Q8N9I0 419 aaPredicted RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 LENG9Q96B70 501 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 HINFPQ9BQA5 517 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 REEP2Q9BRK0 252 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 TDRD3Q9H7E2 651 aaKnown RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 MED4Q9NPJ6 270 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 LUC7LQ9NQ29 371 aaKnown RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 PSD3Q9NYI0 1048 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 TULP2O00295 520 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 GH2P01242 217 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 MYBL2P10244 700 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 HNRNPH2P55795 449 aaKnown RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 CYP4A11Q02928 519 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 CCNI2Q6ZMN8 369 aaPredicted RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 SFR1Q86XK3 245 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 ZC3H3Q8IXZ2 948 aaKnown RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 MMGT1Q8N4V1 131 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 RNF10Q8N5U6 811 aaKnown RBP14.48□□□□□ -0.09
LDLR-203ENST00000535915 SPATA4Q8NEY3 305 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
LDLR-203ENST00000535915 SERPINA10Q9UK55 444 aa14.48□□□□□ -0.09
LDLR-203ENST00000535915 ZNF76P36508 570 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 RBM26Q5T8P6 1007 aaKnown RBP14.47□□□□□ -0.09
LDLR-203ENST00000535915 FAM133AQ8N9E0 248 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 TBC1D5Q92609 795 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 FAM20AQ96MK3 541 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 TSPYL1Q9H0U9 437 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 HPCAL4Q9UM19 191 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 MSH4O15457 936 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 PAFAH1B1P43034 410 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 ITIH3Q06033 890 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 KLHL30Q0D2K2 578 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 KNOP1Q1ED39 458 aaKnown RBP14.47□□□□□ -0.09
LDLR-203ENST00000535915 KLHDC7AQ5VTJ3 777 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 ZNF572Q7Z3I7 529 aaPredicted RBP14.47□□□□□ -0.09
LDLR-203ENST00000535915 SPICE1Q8N0Z3 855 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 LRRC1Q9BTT6 524 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 SMARCAL1Q9NZC9 954 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 EHD2Q9NZN4 543 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 HDAC9Q9UKV0 1011 aa14.47□□□□□ -0.09
LDLR-203ENST00000535915 NPM3O75607 178 aaKnown RBP14.46□□□□□ -0.09
LDLR-203ENST00000535915 IRX3P78415 501 aaPredicted RBP14.46□□□□□ -0.09
LDLR-203ENST00000535915 JAG1P78504 1218 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 EZH2Q15910 746 aaKnown RBP14.46□□□□□ -0.09
LDLR-203ENST00000535915 SLC18A3Q16572 532 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 CYP2W1Q8TAV3 490 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 SELENOOQ9BVL4 669 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 TLR10Q9BXR5 811 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 ARMCX3Q9UH62 379 aaPredicted RBP14.46□□□□□ -0.09
LDLR-203ENST00000535915 H0YIN7 160 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 PRPF6O94906 941 aaKnown RBP14.46□□□□□ -0.09
LDLR-203ENST00000535915 MYBP10242 640 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 ASIC2Q16515 512 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 GANQ9H2C0 597 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 BHMT2Q9H2M3 363 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 TRAF3IP3Q9Y228 551 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 STK24Q9Y6E0 443 aa14.46□□□□□ -0.09
LDLR-203ENST00000535915 OPLAHO14841 1288 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 AARSP49588 968 aaKnown RBP eCLIP14.45□□□□□ -0.1
LDLR-203ENST00000535915 MMP14P50281 582 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 AOC3Q16853 763 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 HDAC7Q8WUI4 952 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 CSRNP1Q96S65 589 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 POLD4Q9HCU8 107 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 AIPL1Q9NZN9 384 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 ADAMTS1Q9UHI8 967 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 A0A087X0T9 212 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 RSPH10B2B2RC85 870 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 CALUO43852 315 aaPredicted RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 SYF2O95926 243 aaKnown RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 FAM228BP0C875 321 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 RSPH10BP0C881 870 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 ACTN1P12814 892 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 CIITAP33076 1130 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 MRPS25P82663 173 aaKnown RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 SLC7A5Q01650 507 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 FRMD5Q7Z6J6 570 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 DMGDHQ9UI17 866 aaKnown RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 TSKSQ9UJT2 592 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 VAV3Q9UKW4 847 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 PRR12Q9ULL5 1215 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 MYH11P35749 1972 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 A0A1W2PRG0 241 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 PDXKO00764 312 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 RNF40O75150 1001 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 TBCAO75347 108 aaKnown RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 PALMO75781 387 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 AFPP02771 609 aaKnown RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 XRCC5P13010 732 aaKnown RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 SLC9A1P19634 815 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 KLRC1P26715 233 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 HOXD13P35453 343 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 RRP1BQ14684 758 aaKnown RBP14.45□□□□□ -0.1
LDLR-203ENST00000535915 NAB2Q15742 525 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 KIAA0753Q2KHM9 967 aa14.45□□□□□ -0.1
LDLR-203ENST00000535915 DCAF17Q5H9S7 520 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms