RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 SDF4Q9BRK5 362 aa18.64■□□□□ 0.57
ATL3-202ENST00000535789 PHF20Q9BVI0 1012 aa18.64■□□□□ 0.57
ATL3-202ENST00000535789 COL4A6Q14031 1691 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 ZBBXA8MT70 800 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 MYOGP15173 224 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 ZNF76P36508 570 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 NEK4P51957 841 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 PRR16Q569H4 304 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 BLIDQ8IZY5 108 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 BICD2Q8TD16 824 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 TBCKQ8TEA7 893 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 GJA10Q969M2 543 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 ERAP1Q9NZ08 941 aa18.63■□□□□ 0.57
ATL3-202ENST00000535789 SPTBN5Q9NRC6 3674 aaKnown RBP18.62■□□□□ 0.57
ATL3-202ENST00000535789 TMEM265A0A087WTH1 108 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 MBLAC1A4D2B0 266 aaPredicted RBP18.62■□□□□ 0.57
ATL3-202ENST00000535789 IPO5O00410 1097 aaKnown RBP18.62■□□□□ 0.57
ATL3-202ENST00000535789 ARHGEF15O94989 841 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 TDP2O95551 362 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 CTSHP09668 335 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 THPOP40225 353 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 SETQ01105 290 aaPredicted RBP18.62■□□□□ 0.57
ATL3-202ENST00000535789 PPFIA1Q13136 1202 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 PLCB4Q15147 1175 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 GRIK4Q16099 956 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 MCTP2Q6DN12 878 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 ABHD15Q6UXT9 468 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 TMCO2Q7Z6W1 182 aaPredicted RBP18.62■□□□□ 0.57
ATL3-202ENST00000535789 NSUN7Q8NE18 718 aaKnown RBP18.62■□□□□ 0.57
ATL3-202ENST00000535789 OXER1Q8TDS5 423 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 GLG1Q92896 1179 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 TIFAQ96CG3 184 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 CDX2Q99626 313 aaPredicted RBP18.62■□□□□ 0.57
ATL3-202ENST00000535789 SMARCAD1Q9H4L7 1026 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 SLC4A7Q9Y6M7 1214 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 NRCAMQ92823 1304 aa18.62■□□□□ 0.57
ATL3-202ENST00000535789 RALGAPA2Q2PPJ7 1873 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 MSH4O15457 936 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 JAK2O60674 1132 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 ATP4AP20648 1035 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 WDR5P61964 334 aaKnown RBP18.61■□□□□ 0.57
ATL3-202ENST00000535789 DEFB103AP81534 67 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 GRIN2CQ14957 1233 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 ANKRD1Q15327 319 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 EARS2Q5JPH6 523 aaKnown RBP18.61■□□□□ 0.57
ATL3-202ENST00000535789 CNKSR3Q6P9H4 555 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 CPLX2Q6PUV4 134 aaKnown RBP18.61■□□□□ 0.57
ATL3-202ENST00000535789 MYLIPQ8WY64 445 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 ZNF577Q9BSK1 485 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 FTOQ9C0B1 505 aaKnown RBP eCLIP18.61■□□□□ 0.57
ATL3-202ENST00000535789 NKX2-4Q9H2Z4 354 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 STXBP5LQ9Y2K9 1186 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 VCANP13611 3396 aa18.61■□□□□ 0.57
ATL3-202ENST00000535789 A0A0C4DFX4 3053 aa18.6■□□□□ 0.57
ATL3-202ENST00000535789 FAM205CA6NFA0 338 aa18.6■□□□□ 0.57
ATL3-202ENST00000535789 CDKL5O76039 1030 aa18.6■□□□□ 0.57
ATL3-202ENST00000535789 INSRRP14616 1297 aa18.6■□□□□ 0.57
ATL3-202ENST00000535789 ATP2A2P16615 1042 aaKnown RBP18.6■□□□□ 0.57
ATL3-202ENST00000535789 MGAT3Q09327 533 aa18.6■□□□□ 0.57
ATL3-202ENST00000535789 MBOAT7Q96N66 472 aa18.6■□□□□ 0.57
ATL3-202ENST00000535789 MTIF3Q9H2K0 278 aaKnown RBP18.6■□□□□ 0.57
ATL3-202ENST00000535789 ZNF576Q9H609 170 aa18.6■□□□□ 0.57
ATL3-202ENST00000535789 ORC3Q9UBD5 711 aaPredicted RBP18.6■□□□□ 0.57
ATL3-202ENST00000535789 TUBE1Q9UJT0 475 aa18.6■□□□□ 0.57
ATL3-202ENST00000535789 TTC3P53804 2025 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 IGSF9BQ9UPX0 1349 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 RSPH10B2B2RC85 870 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 ZBTB42B2RXF5 422 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 BAIAP3O94812 1187 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 RSPH10BP0C881 870 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 STAT5BP51692 787 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 IGBP1P78318 339 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 FAM26DQ5JW98 314 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 PLPPR4Q7Z2D5 763 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 SPRED2Q7Z698 418 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 FAM177A1Q8N128 213 aaPredicted RBP18.59■□□□□ 0.57
ATL3-202ENST00000535789 SLC5A5Q92911 643 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 TNFRSF25Q93038 417 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 TSHZ2Q9NRE2 1034 aa18.59■□□□□ 0.57
ATL3-202ENST00000535789 SLC37A4O43826 429 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 CAND2O75155 1236 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 PARNO95453 639 aaKnown RBP18.58■□□□□ 0.56
ATL3-202ENST00000535789 CHRNA1P02708 482 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 ACTN1P12814 892 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 USP11P51784 963 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 INF2Q27J81 1249 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 PLEKHG4Q58EX7 1191 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 DBF4BQ8NFT6 615 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 ETNPPLQ8TBG4 499 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 TBC1D32Q96NH3 1257 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 SLC9A7Q96T83 725 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 XIRP2A4UGR9 3374 aa18.58■□□□□ 0.56
ATL3-202ENST00000535789 CYP3A7-CYP3A51PA0A087WV96 503 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 GNAT1P11488 350 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 CYP3A7P24462 503 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 RBM25P49756 843 aaKnown RBP18.57■□□□□ 0.56
ATL3-202ENST00000535789 RAB30Q15771 203 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 UGCGQ16739 394 aa18.57■□□□□ 0.56
ATL3-202ENST00000535789 Q4G0T1 1027 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms