RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 PACSIN1Q9BY11 444 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 EHD2Q9NZN4 543 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 COL20A1Q9P218 1284 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 PI4KBQ9UBF8 816 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 DMGDHQ9UI17 866 aaKnown RBP7.91□□□□□ -1.14
RNPC3-209ENST00000533834 TMX2Q9Y320 296 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 JRKLQ9Y4A0 524 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 PCDHA3Q9Y5H8 950 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 NFS1Q9Y697 457 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 COL4A4P53420 1690 aaPredicted RBP7.91□□□□□ -1.14
RNPC3-209ENST00000533834 A0A087X0T9 212 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 GTPBP10A4D1E9 387 aaKnown RBP7.91□□□□□ -1.14
RNPC3-209ENST00000533834 NPHP1O15259 732 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 FAM228BP0C875 321 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 EPB41P11171 864 aaKnown RBP7.91□□□□□ -1.14
RNPC3-209ENST00000533834 GLIPR1L2Q4G1C9 344 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 FAM83BQ5T0W9 1011 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 TMCO3Q6UWJ1 677 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 FRMD5Q7Z6J6 570 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 FAM114A1Q8IWE2 563 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 NLGN1Q8N2Q7 840 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 SCFD2Q8WU76 684 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 TBC1D5Q92609 795 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 OSBPL9Q96SU4 736 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 QTRT2Q9H974 415 aaKnown RBP7.91□□□□□ -1.14
RNPC3-209ENST00000533834 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 PANK4Q9NVE7 773 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 SEC63Q9UGP8 760 aaKnown RBP7.91□□□□□ -1.14
RNPC3-209ENST00000533834 ADAM21Q9UKJ8 722 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 SAR1BQ9Y6B6 198 aa7.91□□□□□ -1.14
RNPC3-209ENST00000533834 TP73O15350 636 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 CAPN2P17655 700 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 ALDH1B1P30837 517 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 GYS2P54840 703 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 FKBP3Q00688 224 aaKnown RBP7.9□□□□□ -1.14
RNPC3-209ENST00000533834 TEX35Q5T0J7 233 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 DCAF12L1Q5VU92 463 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 MREGQ8N565 214 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 RNF10Q8N5U6 811 aaKnown RBP7.9□□□□□ -1.14
RNPC3-209ENST00000533834 TSEN2Q8NCE0 465 aaKnown RBP7.9□□□□□ -1.14
RNPC3-209ENST00000533834 EXOC4Q96A65 974 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 CAMKK2Q96RR4 588 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 DBNDD1Q9H9R9 158 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 PRR12Q9ULL5 1215 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 NCANO14594 1321 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 MOCS3O95396 460 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 MUTP22033 750 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 ECE1P42892 770 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 AMPD3Q01432 767 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 ATP2B2Q01814 1243 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 PPATQ06203 517 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 SLC18A3Q16572 532 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 MYOCDQ8IZQ8 938 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 LNX1Q8TBB1 728 aaPredicted RBP7.9□□□□□ -1.14
RNPC3-209ENST00000533834 PLEKHO2Q8TD55 490 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 CCDC34Q96HJ3 373 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 VAT1LQ9HCJ6 419 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 PDE11AQ9HCR9 933 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 ZHX1Q9UKY1 873 aaPredicted RBP7.9□□□□□ -1.14
RNPC3-209ENST00000533834 PCDHA12Q9UN75 941 aa7.9□□□□□ -1.14
RNPC3-209ENST00000533834 PLXNA1Q9UIW2 1896 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 SPDYE2BA6NHP3 402 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 SLC16A3O15427 465 aaKnown RBP7.9□□□□□ -1.15
RNPC3-209ENST00000533834 MMP10P09238 476 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 SPDYE6P0CI01 402 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 PDE6BP35913 854 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 KRT83P78385 493 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 RINT1Q6NUQ1 792 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 SPATA4Q8NEY3 305 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 CALML4Q96GE6 196 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 RPGRIP1Q96KN7 1286 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 FAM20AQ96MK3 541 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 NT5C3AQ9H0P0 336 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 ARFGAP3Q9NP61 516 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 GUCA1BQ9UMX6 200 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 KIAA1024Q9UPX6 916 aa7.9□□□□□ -1.15
RNPC3-209ENST00000533834 PDCD11Q14690 1871 aaKnown RBP7.9□□□□□ -1.15
RNPC3-209ENST00000533834 PDXKO00764 312 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 ZBTB39O15060 712 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 EIF3DO15371 548 aaKnown RBP eCLIP7.89□□□□□ -1.15
RNPC3-209ENST00000533834 KLRC1P26715 233 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 SPDYE2Q495Y8 402 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 FAM26FQ5R3K3 315 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 CCDC122Q5T0U0 273 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 NFRKBQ6P4R8 1299 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 SLC9A9Q8IVB4 645 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 C1orf131Q8NDD1 294 aaKnown RBP7.89□□□□□ -1.15
RNPC3-209ENST00000533834 NAP1L4Q99733 375 aaKnown RBP7.89□□□□□ -1.15
RNPC3-209ENST00000533834 LRRC1Q9BTT6 524 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 EPB41L4BQ9H329 900 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 SMARCAL1Q9NZC9 954 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 MEIS1O00470 390 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 PMM2O15305 246 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 SERPING1P05155 500 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 CASP4P49662 377 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 HADHBP55084 474 aaKnown RBP7.89□□□□□ -1.15
RNPC3-209ENST00000533834 SNAP25P60880 206 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 SLFN13Q68D06 897 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 AMOTL1Q8IY63 956 aa7.89□□□□□ -1.15
RNPC3-209ENST00000533834 SLFN12Q8IYM2 578 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms