RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CYTH3O43739 400 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 UPP2O95045 317 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 CTSHP09668 335 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 GNAT1P11488 350 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 METAP2P50579 478 aaKnown RBP eCLIP9.99□□□□□ -0.81
COPB1-210ENST00000533533 GPM6BQ13491 265 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 GNPTABQ3T906 1256 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 C8orf34Q49A92 452 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 METTL7BQ6UX53 244 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 TMEM192Q8IY95 271 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 SRBD1Q8N5C6 995 aaKnown RBP9.99□□□□□ -0.81
COPB1-210ENST00000533533 BANK1Q8NDB2 785 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 INPP4AQ96PE3 977 aaPredicted RBP9.99□□□□□ -0.81
COPB1-210ENST00000533533 OSBPL7Q9BZF2 842 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 ZSWIM6Q9HCJ5 1215 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 SETD4Q9NVD3 440 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 RBM28Q9NW13 759 aaKnown RBP9.99□□□□□ -0.81
COPB1-210ENST00000533533 TECTAO75443 2155 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 LOXHD1Q8IVV2 1947 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 COL4A6Q14031 1691 aa9.99□□□□□ -0.81
COPB1-210ENST00000533533 PNMA6FA0A0J9YX94 578 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 SPATA31C2B4DYI2 1134 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 STAM2O75886 525 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 ALADP13716 330 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 ICAM3P32942 547 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
COPB1-210ENST00000533533 MRPS9P82933 396 aaKnown RBP9.98□□□□□ -0.81
COPB1-210ENST00000533533 STK3Q13188 491 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 NEDD9Q14511 834 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 COL19A1Q14993 1142 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 TCEAL5Q5H9L2 206 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 TMTC3Q6ZXV5 915 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 CYFIP1Q7L576 1253 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 APBB2Q92870 758 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 PABPC5Q96DU9 382 aaKnown RBP9.98□□□□□ -0.81
COPB1-210ENST00000533533 GPR20Q99678 358 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 SPZ1Q9BXG8 430 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 IFIH1Q9BYX4 1025 aaKnown RBP9.98□□□□□ -0.81
COPB1-210ENST00000533533 TM6SF1Q9BZW5 370 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 UPF2Q9HAU5 1272 aaKnown RBP9.98□□□□□ -0.81
COPB1-210ENST00000533533 FRMPD4Q14CM0 1322 aa9.98□□□□□ -0.81
COPB1-210ENST00000533533 CCDC196A0A1B0GTZ2 297 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 FIBPO43427 364 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 ADD1P35611 737 aaKnown RBP9.97□□□□□ -0.81
COPB1-210ENST00000533533 ANAPC15P60006 121 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 ADAM17P78536 824 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 AKAP17AQ02040 695 aaKnown RBP9.97□□□□□ -0.81
COPB1-210ENST00000533533 SEMA3FQ13275 785 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 FAM26DQ5JW98 314 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 HEATR3Q7Z4Q2 680 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 TRIM50Q86XT4 487 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 IL17RAQ96F46 866 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 NSUN3Q9H649 340 aaKnown RBP9.97□□□□□ -0.81
COPB1-210ENST00000533533 RTEL1Q9NZ71 1219 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 ZNF215Q9UL58 517 aaPredicted RBP9.97□□□□□ -0.81
COPB1-210ENST00000533533 FAM50BQ9Y247 325 aa9.97□□□□□ -0.81
COPB1-210ENST00000533533 PTPRZ1P23471 2315 aaPredicted RBP9.96□□□□□ -0.81
COPB1-210ENST00000533533 DCXO43602 365 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 NCK2O43639 380 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 PPFIA3O75145 1194 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 GABBR2O75899 941 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 CHRNA1P02708 482 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 SMARCA1P28370 1054 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 CDC27P30260 824 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 NEK4P51957 841 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 ARHGAP4P98171 946 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 ZP2Q05996 745 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 TOB2Q14106 344 aaPredicted RBP9.96□□□□□ -0.82
COPB1-210ENST00000533533 UTP14CQ5TAP6 766 aaKnown RBP9.96□□□□□ -0.82
COPB1-210ENST00000533533 EP400NLQ6ZTU2 488 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 FIBCD1Q8N539 461 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 LMBR1Q8WVP7 490 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 UIMC1Q96RL1 719 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 SENP7Q9BQF6 1050 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 C22orf23Q9BZE7 217 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 NCOA5Q9HCD5 579 aaKnown RBP9.96□□□□□ -0.82
COPB1-210ENST00000533533 PRKAG3Q9UGI9 489 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 TELO2Q9Y4R8 837 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 V9GY48 417 aaPredicted RBP9.96□□□□□ -0.82
COPB1-210ENST00000533533 NRCAMQ92823 1304 aa9.96□□□□□ -0.82
COPB1-210ENST00000533533 RIF1Q5UIP0 2472 aaKnown RBP9.96□□□□□ -0.82
COPB1-210ENST00000533533 POTEB3A0JP26 581 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 C5orf67F2Z3F1 127 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 CPLX1O14810 134 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 RB1P06400 928 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 CD44P16070 742 aaKnown RBP9.95□□□□□ -0.82
COPB1-210ENST00000533533 PDIA3P30101 505 aaKnown RBP9.95□□□□□ -0.82
COPB1-210ENST00000533533 CTNNB1P35222 781 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 BMPR1AP36894 532 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 LTBRP36941 435 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 SP4Q02446 784 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 PCNX4Q63HM2 1172 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 TAF2Q6P1X5 1199 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 XRRA1Q6P2D8 792 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 USP17L6PQ6QN14 398 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 POTEBQ6S5H4 581 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 RPAINQ86UA6 219 aa9.95□□□□□ -0.82
COPB1-210ENST00000533533 SMARCC2Q8TAQ2 1214 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms