RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 BAIAP3O94812 1187 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 CCNE2O96020 404 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 GCFC2P16383 781 aaKnown RBP11.16□□□□□ -0.62
NUP98-220ENST00000533346 STAT5BP51692 787 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 CCL23P55773 120 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
NUP98-220ENST00000533346 TAF2Q6P1X5 1199 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 LRRC8DQ7L1W4 858 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 PHOSPHO2Q8TCD6 241 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 ATP6V0A1Q93050 837 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 RNPC3Q96LT9 517 aaKnown RBP11.16□□□□□ -0.62
NUP98-220ENST00000533346 TBC1D32Q96NH3 1257 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
NUP98-220ENST00000533346 AZI2Q9H6S1 392 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 UPF2Q9HAU5 1272 aaKnown RBP11.16□□□□□ -0.62
NUP98-220ENST00000533346 KCNJ14Q9UNX9 436 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 PCDHA10Q9Y5I2 948 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 VCANP13611 3396 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 GBF1Q92538 1859 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 COL1A2P08123 1366 aa11.16□□□□□ -0.62
NUP98-220ENST00000533346 SIP14410 1827 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 TREHO43280 583 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 SORBS3O60504 671 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 PSMD10O75832 226 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 MMP1P03956 469 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 SFNP31947 248 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 MCM2P49736 904 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 ZNF200P98182 395 aaPredicted RBP11.15□□□□□ -0.62
NUP98-220ENST00000533346 PRR16Q569H4 304 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 MARCH8Q5T0T0 291 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 UTP14CQ5TAP6 766 aaKnown RBP11.15□□□□□ -0.62
NUP98-220ENST00000533346 MIS18BP1Q6P0N0 1132 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 NEK8Q86SG6 692 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 TRIM50Q86XT4 487 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 LMBR1Q8WVP7 490 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 GLG1Q92896 1179 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 WNT8BQ93098 351 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 SCLYQ96I15 445 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 FAM20AQ96MK3 541 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 SETD4Q9NVD3 440 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 SQORQ9Y6N5 450 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 PTPRSQ13332 1948 aa11.15□□□□□ -0.62
NUP98-220ENST00000533346 CCDC194A0A1B0GVG4 234 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 ST18O60284 1047 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 HBP1O60381 514 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 NBNO60934 754 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 EFCAB14O75071 495 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 ACRP10323 421 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 ACTN1P12814 892 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 KRT2P35908 639 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
NUP98-220ENST00000533346 PLCB4Q15147 1175 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 ZNF618Q5T7W0 954 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 FAM160B1Q5W0V3 765 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 ETNPPLQ8TBG4 499 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 PPP1R13LQ8WUF5 828 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 BBXQ8WY36 941 aaPredicted RBP11.14□□□□□ -0.63
NUP98-220ENST00000533346 BACH2Q9BYV9 841 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 BRMS1Q9HCU9 246 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 KCNMB3Q9NPA1 279 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 PCDHA2Q9Y5H9 948 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 MICAL3Q7RTP6 2002 aa11.14□□□□□ -0.63
NUP98-220ENST00000533346 IGSF9BQ9UPX0 1349 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 EVPLQ92817 2033 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 LAMA2P24043 3122 aaKnown RBP11.13□□□□□ -0.63
NUP98-220ENST00000533346 SMIM35A0A1B0GVV1 85 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 ABHD14A-ACY1A0A1B0GW23 586 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 WDR64B1ANS9 1081 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 RSPH10B2B2RC85 870 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 JAK2O60674 1132 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 PSAPP07602 524 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 RSPH10BP0C881 870 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 INSRRP14616 1297 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 ATP4AP20648 1035 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 JAK3P52333 1124 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 SP4Q02446 784 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 MGAT3Q09327 533 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 PPFIA1Q13136 1202 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 MBTPS1Q14703 1052 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 GRIK4Q16099 956 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 INF2Q27J81 1249 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 PLEKHG4Q58EX7 1191 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 ZNF484Q5JVG2 852 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 KRT40Q6A162 431 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 CNKSR3Q6P9H4 555 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 CCDC60Q8IWA6 550 aaPredicted RBP11.13□□□□□ -0.63
NUP98-220ENST00000533346 NME8Q8N427 588 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 OXER1Q8TDS5 423 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 ATP8B4Q8TF62 1192 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 SLC9A7Q96T83 725 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 TEKT3Q9BXF9 490 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 ZNF302Q9NR11 478 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 LOXHD1Q8IVV2 1947 aa11.13□□□□□ -0.63
NUP98-220ENST00000533346 KDM3AQ9Y4C1 1321 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 TDP2O95551 362 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 CHMP4BP1P59074 171 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms