RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SLC26A2P50443 739 aa23.15■■□□□ 1.3
CCS-208ENST00000533244 STAT5BP51692 787 aa23.15■■□□□ 1.3
CCS-208ENST00000533244 B3GNT9Q6UX72 402 aa23.15■■□□□ 1.3
CCS-208ENST00000533244 CCDC60Q8IWA6 550 aaPredicted RBP23.15■■□□□ 1.3
CCS-208ENST00000533244 ATP6V0A1Q93050 837 aa23.15■■□□□ 1.3
CCS-208ENST00000533244 SCLYQ96I15 445 aa23.15■■□□□ 1.3
CCS-208ENST00000533244 NAP1L4Q99733 375 aaKnown RBP23.15■■□□□ 1.3
CCS-208ENST00000533244 TREHO43280 583 aa23.14■■□□□ 1.29
CCS-208ENST00000533244 IQCF3P0C7M6 154 aa23.14■■□□□ 1.29
CCS-208ENST00000533244 GNAT1P11488 350 aa23.14■■□□□ 1.29
CCS-208ENST00000533244 TMEM240Q5SV17 173 aa23.14■■□□□ 1.29
CCS-208ENST00000533244 MIS18BP1Q6P0N0 1132 aa23.14■■□□□ 1.29
CCS-208ENST00000533244 FAM184AQ8NB25 1140 aa23.14■■□□□ 1.29
CCS-208ENST00000533244 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.14■■□□□ 1.291e-7■■■□□ 18.1
CCS-208ENST00000533244 KCNMB3Q9NPA1 279 aa23.14■■□□□ 1.29
CCS-208ENST00000533244 GAS7O60861 476 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 CKBP12277 381 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 RFC2P35250 354 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 GUCY1B3Q02153 619 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 PLCB4Q15147 1175 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 LRCH2Q5VUJ6 765 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 PSRC1Q6PGN9 363 aaPredicted RBP23.13■■□□□ 1.29
CCS-208ENST00000533244 TRAF7Q6Q0C0 670 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 RETREG2Q8NC44 543 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 GJA10Q969M2 543 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 TEKT3Q9BXF9 490 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 PCDHA10Q9Y5I2 948 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 SCN5AQ14524 2016 aa23.13■■□□□ 1.29
CCS-208ENST00000533244 WDR64B1ANS9 1081 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 SOX1O00570 391 aaPredicted RBP23.12■■□□□ 1.29
CCS-208ENST00000533244 SELPP16109 830 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 PPFIA1Q13136 1202 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 SAFBQ15424 915 aaKnown RBP eCLIP23.12■■□□□ 1.29
CCS-208ENST00000533244 RASIP1Q5U651 963 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 FAM160B1Q5W0V3 765 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 KAT6AQ92794 2004 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 UNC45AQ9H3U1 944 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 ZNF302Q9NR11 478 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 TCEAL9Q9UHQ7 104 aa23.12■■□□□ 1.29
CCS-208ENST00000533244 MAFBQ9Y5Q3 323 aaPredicted RBP23.12■■□□□ 1.29
CCS-208ENST00000533244 WDR81Q562E7 1941 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 MBLAC1A4D2B0 266 aaPredicted RBP23.11■■□□□ 1.29
CCS-208ENST00000533244 TBX3O15119 743 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 CCNT1O60563 726 aaKnown RBP23.11■■□□□ 1.29
CCS-208ENST00000533244 PFKMP08237 780 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 ACRP10323 421 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 GRIK4Q16099 956 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 MARCH8Q5T0T0 291 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 LRRC8DQ7L1W4 858 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 FAM20AQ96MK3 541 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 FOXP1Q9H334 677 aaPredicted RBP23.11■■□□□ 1.29
CCS-208ENST00000533244 IGSF9BQ9UPX0 1349 aa23.11■■□□□ 1.29
CCS-208ENST00000533244 BACH1O14867 736 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 PSAPP07602 524 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 INSRRP14616 1297 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 ATP4AP20648 1035 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 SFNP31947 248 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 JAK3P52333 1124 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 GPNMBQ14956 572 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 SWSAP1Q6NVH7 229 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 ZNF365Q70YC5 407 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 RPUSD2Q8IZ73 545 aaKnown RBP23.1■■□□□ 1.29
CCS-208ENST00000533244 RDM1Q8NG50 284 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 DISC1Q9NRI5 854 aa23.1■■□□□ 1.29
CCS-208ENST00000533244 RRN3P2A6NIE6 340 aa23.09■■□□□ 1.29
CCS-208ENST00000533244 CAND2O75155 1236 aa23.09■■□□□ 1.29
CCS-208ENST00000533244 PARNO95453 639 aaKnown RBP23.09■■□□□ 1.29
CCS-208ENST00000533244 PDXDC2PQ6P474 469 aa23.09■■□□□ 1.29
CCS-208ENST00000533244 RPAINQ86UA6 219 aa23.09■■□□□ 1.29
CCS-208ENST00000533244 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
CCS-208ENST00000533244 ATP8B4Q8TF62 1192 aa23.09■■□□□ 1.29
CCS-208ENST00000533244 HAS1Q92839 578 aa23.09■■□□□ 1.29
CCS-208ENST00000533244 TNPO1Q92973 898 aaKnown RBP23.09■■□□□ 1.29
CCS-208ENST00000533244 RNPC3Q96LT9 517 aaKnown RBP23.09■■□□□ 1.29
CCS-208ENST00000533244 LAMA2P24043 3122 aaKnown RBP23.09■■□□□ 1.29
CCS-208ENST00000533244 POTEB3A0JP26 581 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 WNT7AO00755 349 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 CUL4AQ13619 759 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 ZNF618Q5T7W0 954 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 POTEBQ6S5H4 581 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 HERVK_113Q902F9 699 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 TUBE1Q9UJT0 475 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 VAV3Q9UKW4 847 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 TRPC6Q9Y210 931 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 KIF3AQ9Y496 699 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 MYH9P35579 1960 aaKnown RBP23.08■■□□□ 1.29
CCS-208ENST00000533244 TET1Q8NFU7 2136 aa23.08■■□□□ 1.29
CCS-208ENST00000533244 HBP1O60381 514 aa23.08■■□□□ 1.28
CCS-208ENST00000533244 CXCL10P02778 98 aa23.08■■□□□ 1.28
CCS-208ENST00000533244 PPP2R5CQ13362 524 aa23.08■■□□□ 1.28
CCS-208ENST00000533244 MBTPS1Q14703 1052 aa23.08■■□□□ 1.28
CCS-208ENST00000533244 TAF2Q6P1X5 1199 aa23.08■■□□□ 1.28
CCS-208ENST00000533244 GABBR1Q9UBS5 961 aa23.08■■□□□ 1.28
CCS-208ENST00000533244 COL1A2P08123 1366 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 SZT2Q5T011 3432 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 CHMP2AO43633 222 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 FGBP02675 491 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 U2AF2P26368 475 aaKnown RBP eCLIP23.07■■□□□ 1.28
CCS-208ENST00000533244 GJB2P29033 226 aa23.07■■□□□ 1.28
CCS-208ENST00000533244 THPOP40225 353 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms