RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 PIGOQ8TEQ8 1089 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 PDGFDQ9GZP0 370 aaPredicted RBP16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 ZNF70Q9UC06 446 aaPredicted RBP16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 SNX12Q9UMY4 172 aa16.91■□□□□ 0.3
CACNA1E-208ENST00000533229 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 CNTNAP1P78357 1384 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 SFI1A8K8P3 1242 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 CETN3O15182 167 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 PJA2O43164 708 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 CTTNQ14247 550 aaKnown RBP16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 TDRD12Q587J7 1177 aaKnown RBP16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 PPP4R3CPQ6ZMV5 832 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 OTOP1Q7RTM1 612 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 HDXQ7Z353 690 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 COG1Q8WTW3 980 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 GMLQ99445 158 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 HSD17B14Q9BPX1 270 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 TACC1O75410 805 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 ZYXQ15942 572 aaKnown RBP16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 SFMBT2Q5VUG0 894 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 ZNF772Q68DY9 489 aaPredicted RBP16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 DPY19L2P1Q6NXN4 242 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 FAM151AQ8WW52 585 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 POLR3CQ9BUI4 534 aaPredicted RBP16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 ARHGEF10LQ9HCE6 1279 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 PDE11AQ9HCR9 933 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 ZBTB21Q9ULJ3 1066 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 SYNPO2Q9UMS6 1093 aa16.9■□□□□ 0.3
CACNA1E-208ENST00000533229 RBAK-RBAKDNI3L0D1 243 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 AKAP3O75969 853 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 SLITRK3O94933 977 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 ACTN1P12814 892 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 GYS2P54840 703 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 SLC9C1Q4G0N8 1177 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 MIGA2Q7L4E1 593 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 SYN2Q92777 582 aaPredicted RBP16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 GLIS2Q9BZE0 524 aaPredicted RBP16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 GANQ9H2C0 597 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 IKZF4Q9H2S9 585 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
CACNA1E-208ENST00000533229 CHMP2AO43633 222 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 BUB1O43683 1085 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 ZMYND10O75800 440 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 PSMD10O75832 226 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 EYA4O95677 639 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 SERPING1P05155 500 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 SLC9A1P19634 815 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 ARID5AQ03989 594 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 CASP8Q14790 479 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 EZH2Q15910 746 aaKnown RBP16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 RINT1Q6NUQ1 792 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 NFRKBQ6P4R8 1299 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 PSMB7Q99436 277 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 TMEM39BQ9GZU3 492 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 LRRIQ3A6PVS8 624 aaPredicted RBP16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 NCK2O43639 380 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 N4BP1O75113 896 aaKnown RBP16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 VIL1P09327 827 aaKnown RBP16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 CXCR5P32302 372 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 CASP4P49662 377 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 CKAP4Q07065 602 aaKnown RBP16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 DLGAP5Q15398 846 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 CAGE1Q8TC20 777 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 RPGRIP1Q96KN7 1286 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 ASTN1O14525 1302 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 SMCHD1A6NHR9 2005 aa16.88■□□□□ 0.29
CACNA1E-208ENST00000533229 PDXKO00764 312 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 TUBBP07437 444 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 RAPGEF1Q13905 1077 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 ENOX2Q16206 610 aaKnown RBP16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 FRMD5Q7Z6J6 570 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 TPH2Q8IWU9 490 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 DYDC2Q96IM9 177 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 NUCKS1Q9H1E3 243 aaKnown RBP16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 VEZTQ9HBM0 779 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 GOPCQ9HD26 462 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 FBXO28Q9NVF7 368 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 SMARCAL1Q9NZC9 954 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 WRAP73Q9P2S5 460 aaPredicted RBP16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 ARMCX3Q9UH62 379 aaPredicted RBP16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 COL4A5P29400 1685 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 A0A087X0T9 212 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 GCOM1H8Y6P7 765 aaPredicted RBP16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 CLIC2O15247 247 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 GCNT3O95395 438 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 FAM228BP0C875 321 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 POLR2MP0CAP2 368 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 BMT2Q1RMZ1 405 aa16.87■□□□□ 0.29
CACNA1E-208ENST00000533229 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms