RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 EPG5Q9HCE0 2579 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 ZNF292O60281 2723 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 H3BRB1 525 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 OPLAHO14841 1288 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 KDM4AO75164 1064 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 GLP2RO95838 553 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 MMP1P03956 469 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 FGRP09769 529 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 HSPD1P10809 573 aaKnown RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 HOXD8P13378 290 aaPredicted RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 MX1P20591 662 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 GPATCH4Q5T3I0 446 aaKnown RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 MFSD6Q6ZSS7 791 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 NLRC5Q86WI3 1866 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 FCHSD1Q86WN1 690 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 MCF2L2Q86YR7 1114 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 FBXL6Q8N531 539 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 PNMA1Q8ND90 353 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 UBE2Q2Q8WVN8 375 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 APOL5Q9BWW9 433 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 MFRPQ9BY79 579 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 TUT1Q9H6E5 874 aaKnown RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 JMJD4Q9H9V9 463 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 TCP11L1Q9NUJ3 509 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 FAM186AA6NE01 2351 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 TTC41PQ6P2S7 1318 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 COL4A6Q14031 1691 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 TRIM6-TRIM34B2RNG4 842 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 LOC730098B7Z3J9 87 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 C5orf67F2Z3F1 127 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 NOP56O00567 594 aaKnown RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 PER2O15055 1255 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 PPP1R11O60927 126 aaPredicted RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 PPFIA4O75335 1185 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 CHRNA1P02708 482 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 ITGB1P05556 798 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 NMIQ13287 307 aaPredicted RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 ADAM15Q13444 863 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 LPIN1Q14693 890 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 PGM5Q15124 567 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 CYFIP1Q7L576 1253 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 ASCL5Q7RTU5 278 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 HOMER1Q86YM7 354 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 SMRP1Q8NCR6 262 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 LMBR1Q8WVP7 490 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 POF1BQ8WVV4 589 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 LINC01599Q8WXQ3 324 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 PIBF1Q8WXW3 757 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 ASIC4Q96FT7 647 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 MSLNLQ96KJ4 702 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 LMAN2LQ9H0V9 348 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 SMOC2Q9H3U7 446 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 KAT14Q9H8E8 782 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 RC3H2Q9HBD1 1191 aaKnown RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 CDH22Q9UJ99 828 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 PNMA2Q9UL42 364 aa4.1□□□□□ -1.75
PTPRC-213ENST00000529828 MRPL11Q9Y3B7 192 aaKnown RBP4.1□□□□□ -1.75
PTPRC-213ENST00000529828 KIAA1217Q5T5P2 1943 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 EP300Q09472 2414 aaPredicted RBP4.09□□□□□ -1.75
PTPRC-213ENST00000529828 B4E1Z4 1266 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 NCK2O43639 380 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 EYA4O95677 639 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 RB1P06400 928 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 MARK3P27448 753 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 CCND2P30279 289 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 AVPR2P30518 371 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 HOXC8P31273 242 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 CD52P31358 61 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 HSD17B4P51659 736 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 IGBP1P78318 339 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 FOXK1P85037 733 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 SIGLEC14Q08ET2 396 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 TMEM62Q0P6H9 643 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 ALX1Q15699 326 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 BMP8AQ7Z5Y6 402 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 ZBTB33Q86T24 672 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 STAG2Q8N3U4 1231 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 KLHL23Q8NBE8 558 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 VN1R2Q8NFZ6 395 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 ESR2Q92731 530 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 APBB2Q92870 758 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 CLP1Q92989 425 aaKnown RBP4.09□□□□□ -1.75
PTPRC-213ENST00000529828 CHMP4BQ9H444 224 aaKnown RBP4.09□□□□□ -1.75
PTPRC-213ENST00000529828 TSHZ2Q9NRE2 1034 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 RTEL1Q9NZ71 1219 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 PLAGL2Q9UPG8 496 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 STK24Q9Y6E0 443 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 KMT2EQ8IZD2 1858 aa4.09□□□□□ -1.75
PTPRC-213ENST00000529828 ENPP3O14638 875 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 DGKIO75912 1065 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 PARP1P09874 1014 aaKnown RBP4.09□□□□□ -1.76
PTPRC-213ENST00000529828 PLCB2Q00722 1185 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 MGAT3Q09327 533 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 APOBRQ0VD83 1088 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 SEMA3FQ13275 785 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 MCMDC2Q4G0Z9 681 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 ASPRV1Q53RT3 343 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 SPOUT1Q5T280 376 aaKnown RBP4.09□□□□□ -1.76
PTPRC-213ENST00000529828 LLGL2Q6P1M3 1020 aa4.09□□□□□ -1.76
PTPRC-213ENST00000529828 LAPTM4BQ86VI4 370 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms