RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SEPT7Q16181 437 aaKnown RBP8.21□□□□□ -1.1
PCF11-202ENST00000528336 ZNF662Q6ZS27 426 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 THNSL2Q86YJ6 484 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 ADGRG2Q8IZP9 1017 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 KYQ8NBH2 561 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 TOX2Q96NM4 488 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.21□□□□□ -1.1
PCF11-202ENST00000528336 SLC39A2Q9NP94 309 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 HSPBP1Q9NZL4 362 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 CROTQ9UKG9 612 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 B3GALT1Q9Y5Z6 326 aa8.21□□□□□ -1.1
PCF11-202ENST00000528336 GAS7O60861 476 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 GLRBP48167 497 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 SCNN1BP51168 640 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 KIF11P52732 1056 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 HTRA3P83110 453 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 DBPQ10586 325 aaPredicted RBP8.2□□□□□ -1.1
PCF11-202ENST00000528336 ADAM9Q13443 819 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 CILP2Q8IUL8 1156 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 TTLL6Q8N841 843 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 ZNF526Q8TF50 670 aaPredicted RBP8.2□□□□□ -1.1
PCF11-202ENST00000528336 DLG3Q92796 817 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 CLIC6Q96NY7 704 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 TMEM209Q96SK2 561 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 KRTAP4-8Q9BYQ9 185 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 SPATA6Q9NWH7 488 aaPredicted RBP8.2□□□□□ -1.1
PCF11-202ENST00000528336 THG1LQ9NWX6 298 aaKnown RBP8.2□□□□□ -1.1
PCF11-202ENST00000528336 ARHGAP28Q9P2N2 729 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 MAPRE3Q9UPY8 281 aa8.2□□□□□ -1.1
PCF11-202ENST00000528336 CCDC180Q9P1Z9 1646 aa8.19□□□□□ -1.1
PCF11-202ENST00000528336 H7C1D1 291 aa8.19□□□□□ -1.1
PCF11-202ENST00000528336 F2P00734 622 aa8.19□□□□□ -1.1
PCF11-202ENST00000528336 MMEP08473 750 aa8.19□□□□□ -1.1
PCF11-202ENST00000528336 ATP2A2P16615 1042 aaKnown RBP8.19□□□□□ -1.1
PCF11-202ENST00000528336 SART3Q15020 963 aaKnown RBP8.19□□□□□ -1.1
PCF11-202ENST00000528336 KIF18BQ86Y91 864 aa8.19□□□□□ -1.1
PCF11-202ENST00000528336 ORAI3Q9BRQ5 295 aa8.19□□□□□ -1.1
PCF11-202ENST00000528336 PCIF1Q9H4Z3 704 aa8.19□□□□□ -1.1
PCF11-202ENST00000528336 H2AFY2Q9P0M6 372 aaPredicted RBP8.19□□□□□ -1.1
PCF11-202ENST00000528336 A0A1B0GTL3 188 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 ZNF839A8K0R7 811 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 DVL2O14641 736 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 FFAR3O14843 346 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 FOXP2O15409 715 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
PCF11-202ENST00000528336 SLC9A1P19634 815 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 ZNF174Q15697 407 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 SKIDA1Q1XH10 827 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 CT47A1Q5JQC4 288 aaPredicted RBP8.18□□□□□ -1.1
PCF11-202ENST00000528336 TCERG1LQ5VWI1 586 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 DDX46Q7L014 1031 aaKnown RBP8.18□□□□□ -1.1
PCF11-202ENST00000528336 TMEM151BQ8IW70 566 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 KIAA1958Q8N8K9 716 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 OR2W6PQ8NHA6 318 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 CHAC2Q8WUX2 184 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 CHTF18Q8WVB6 975 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 ERCC4Q92889 916 aaPredicted RBP8.18□□□□□ -1.1
PCF11-202ENST00000528336 GPR101Q96P66 508 aaPredicted RBP8.18□□□□□ -1.1
PCF11-202ENST00000528336 OXSMQ9NWU1 459 aa8.18□□□□□ -1.1
PCF11-202ENST00000528336 RASSF10A6NK89 507 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 CNGA1P29973 690 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 THBS2P35442 1172 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 DSG1Q02413 1049 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 RTP5Q14D33 572 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 VWA3BQ502W6 1294 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 TTLL7Q6ZT98 887 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 RNF180Q86T96 592 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 SAPCD2Q86UD0 394 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 DTX3Q8N9I9 347 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 HIPK4Q8NE63 616 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 ZSCAN18Q8TBC5 510 aaPredicted RBP8.17□□□□□ -1.1
PCF11-202ENST00000528336 ASB15Q8WXK1 588 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 GBP4Q96PP9 640 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 CAAP1Q9H8G2 361 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 GOLGA2P5Q9HBQ8 144 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 DLL4Q9NR61 685 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 UCKL1Q9NWZ5 548 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 ARHGAP20Q9P2F6 1191 aa8.17□□□□□ -1.1
PCF11-202ENST00000528336 PRAMEF22A3QJZ6 481 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 MC4RP32245 332 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 SOX5P35711 763 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 STAT3P40763 770 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 IL2P60568 153 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 HERVK_113P62684 666 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 CATSPEREQ5SY80 951 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 PRAMEF18Q5VWM3 479 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 CC2D1AQ6P1N0 951 aaPredicted RBP8.16□□□□□ -1.1
PCF11-202ENST00000528336 FILIP1Q7Z7B0 1213 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 IGDCC4Q8TDY8 1250 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 ZFP69BQ9UJL9 534 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 PRKAB1Q9Y478 270 aa8.16□□□□□ -1.1
PCF11-202ENST00000528336 DDX3XO00571 662 aaKnown RBP eCLIP8.15□□□□□ -1.1
PCF11-202ENST00000528336 FBXO21O94952 628 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 PTGS1P23219 599 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 AOAHP28039 575 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 DLX2Q07687 328 aaPredicted RBP8.15□□□□□ -1.1
PCF11-202ENST00000528336 STRN3Q13033 797 aa8.15□□□□□ -1.1
PCF11-202ENST00000528336 RNF187Q5TA31 235 aaPredicted RBP8.15□□□□□ -1.1
PCF11-202ENST00000528336 STRA8Q7Z7C7 330 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms