RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GPR85P60893 370 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 ARID5AQ03989 594 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 SPDYAQ5MJ70 313 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 VASNQ6EMK4 673 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 ZNF585AQ6P3V2 769 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 Q6ZSN1 163 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 ARHGEF18Q6ZSZ5 1173 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 ANKS3Q6ZW76 656 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 USP53Q70EK8 1073 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 STPG3Q8N7X2 389 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 CHST13Q8NET6 341 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 ST13P5Q8NFI4 369 aaPredicted RBP2.84□□□□□ -1.95
CD44-212ENST00000524922 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.84□□□□□ -1.95
CD44-212ENST00000524922 FBXO41Q8TF61 875 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 KISS1RQ969F8 398 aaPredicted RBP2.84□□□□□ -1.95
CD44-212ENST00000524922 CHAMP1Q96JM3 812 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 GNRHR2Q96P88 292 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 ZFYVE21Q9BQ24 234 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 AARSD1Q9BTE6 412 aaKnown RBP2.84□□□□□ -1.95
CD44-212ENST00000524922 PCED1AQ9H1Q7 454 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 FTSJ1Q9UET6 329 aa2.84□□□□□ -1.95
CD44-212ENST00000524922 POLA1P09884 1462 aaPredicted RBP2.84□□□□□ -1.96
CD44-212ENST00000524922 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.83□□□□□ -1.96
CD44-212ENST00000524922 FAM90A27PA6NNH2 459 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 CYR61O00622 381 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 PRODHO43272 600 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 SUV39H1O43463 412 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 MAFKO60675 156 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 SOD2P04179 222 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 AMY2AP04746 511 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 AMY2BP19961 511 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 DBPQ10586 325 aaPredicted RBP2.83□□□□□ -1.96
CD44-212ENST00000524922 TOP3AQ13472 1001 aaPredicted RBP2.83□□□□□ -1.96
CD44-212ENST00000524922 RAB33AQ14088 237 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 HSP90AA2PQ14568 343 aaPredicted RBP2.83□□□□□ -1.96
CD44-212ENST00000524922 KIZQ2M2Z5 673 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 FOXB2Q5VYV0 432 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 KCTD1Q719H9 257 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 GPR155Q7Z3F1 870 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.83□□□□□ -1.96
CD44-212ENST00000524922 VPS37DQ86XT2 251 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 REXO1L1PQ8IX06 675 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 CFHR4Q92496 578 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 ZNF428Q96B54 188 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 ZNF669Q96BR6 464 aaPredicted RBP2.83□□□□□ -1.96
CD44-212ENST00000524922 CD244Q9BZW8 370 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 IPPKQ9H8X2 491 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 BARX1Q9HBU1 254 aaPredicted RBP2.83□□□□□ -1.96
CD44-212ENST00000524922 BTBD7Q9P203 1132 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 DSEQ9UL01 958 aa2.83□□□□□ -1.96
CD44-212ENST00000524922 SHROOM2Q13796 1616 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 ARVCFO00192 962 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 MAN2B1O00754 1011 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 MPIG6BO95866 241 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 AMHP03971 560 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 ENO2P09104 434 aaPredicted RBP2.82□□□□□ -1.96
CD44-212ENST00000524922 GLRBP48167 497 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 KLF10Q13118 480 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 SEC23AQ15436 765 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 STILQ15468 1287 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 TBR1Q16650 682 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 TM4SF20Q53R12 229 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 MIIPQ5JXC2 388 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 NSMFQ6X4W1 530 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 SPATC1Q76KD6 591 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 RALYLQ86SE5 291 aaKnown RBP2.82□□□□□ -1.96
CD44-212ENST00000524922 ZFPM1Q8IX07 1006 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 PALM2Q8IXS6 379 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 IFNL3Q8IZI9 196 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 PCDH19Q8TAB3 1148 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 ZNF503Q96F45 646 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 NEIL1Q96FI4 390 aaPredicted RBP2.82□□□□□ -1.96
CD44-212ENST00000524922 CDK5RAP1Q96SZ6 601 aaKnown RBP2.82□□□□□ -1.96
CD44-212ENST00000524922 KCNJ15Q99712 375 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 KRTAP9-8Q9BYQ0 159 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 VPS11Q9H270 941 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 ARHGAP20Q9P2F6 1191 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 ING1Q9UK53 422 aaPredicted RBP2.82□□□□□ -1.96
CD44-212ENST00000524922 SRPK3Q9UPE1 567 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 ZDHHC9Q9Y397 364 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 TRAF6Q9Y4K3 522 aa2.82□□□□□ -1.96
CD44-212ENST00000524922 ZNF561-AS1K7EIQ3 104 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 AGRPO00253 132 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 MUSKO15146 869 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 C4BPAP04003 597 aaKnown RBP2.81□□□□□ -1.96
CD44-212ENST00000524922 GNAT1P11488 350 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 PTPN1P18031 435 aaKnown RBP2.81□□□□□ -1.96
CD44-212ENST00000524922 POLD1P28340 1107 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 DNAJA1P31689 397 aaKnown RBP2.81□□□□□ -1.96
CD44-212ENST00000524922 SPIRE1Q08AE8 756 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 RNF151Q2KHN1 245 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 AGBL4Q5VU57 503 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 FSTL4Q6MZW2 842 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 LARP4Q71RC2 724 aaKnown RBP eCLIP2.81□□□□□ -1.96
CD44-212ENST00000524922 FUKQ8N0W3 1084 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 EDAQ92838 391 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 LMF1Q96S06 567 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 TACO1Q9BSH4 297 aaKnown RBP2.81□□□□□ -1.96
CD44-212ENST00000524922 SEMA4AQ9H3S1 761 aa2.81□□□□□ -1.96
CD44-212ENST00000524922 SMURF1Q9HCE7 757 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms