RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 ASPSCR1Q9BZE9 553 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 SMOC1Q9H4F8 434 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 SLC6A20Q9NP91 592 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 MYOTQ9UBF9 498 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 PCDHA8Q9Y5H6 950 aa6.51□□□□□ -1.37
HMGB1P1-201ENST00000522557 SLC27A2O14975 620 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 KPNA6O60684 536 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 F2P00734 622 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 LRG1P02750 347 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 SARSP49591 514 aaKnown RBP6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 ITGA1P56199 1179 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 STAT4Q14765 748 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 KIZQ2M2Z5 673 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 DDX46Q7L014 1031 aaKnown RBP6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 OTOP1Q7RTM1 612 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 FERMT3Q86UX7 667 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 ZC3H18Q86VM9 953 aaKnown RBP6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 KYQ8NBH2 561 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 CLEC4DQ8WXI8 215 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 TOE1Q96GM8 510 aaKnown RBP6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 ADAM7Q9H2U9 754 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 DTLQ9NZJ0 730 aa6.5□□□□□ -1.37
HMGB1P1-201ENST00000522557 KRIT1O00522 736 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 NKRFO15226 690 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 BRINP1O60477 761 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 SOD2P04179 222 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 S100BP04271 92 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 GRK2P25098 689 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 THBS2P35442 1172 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 GRK3P35626 688 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 NKX3-2P78367 333 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 GUCY1A3Q02108 690 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 SKOR2Q2VWA4 1001 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 RNF219Q5W0B1 726 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 TEPPQ6URK8 271 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 TTLL7Q6ZT98 887 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 OTOP3Q7RTS5 596 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 OVCH1Q7RTY7 1134 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 SMC1BQ8NDV3 1235 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 LEO1Q8WVC0 666 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 TRIM8Q9BZR9 551 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 IPPKQ9H8X2 491 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 ASH2LQ9UBL3 628 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 WASF3Q9UPY6 502 aa6.49□□□□□ -1.37
HMGB1P1-201ENST00000522557 NEMP1O14524 444 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 LTFP02788 710 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 ADCYAP1R1P41586 468 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 GRIN1Q05586 938 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 ADAM9Q13443 819 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 CFAP100Q494V2 611 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 ODR4Q5SWX8 454 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 NT5DC1Q5TFE4 455 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 PIK3R6Q5UE93 754 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 RAVER1Q8IY67 606 aaKnown RBP6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 RELTQ969Z4 430 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 PCDH18Q9HCL0 1135 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 NTMQ9P121 344 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 SAMD15Q9P1V8 674 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 RBPJLQ9UBG7 517 aa6.48□□□□□ -1.37
HMGB1P1-201ENST00000522557 ZNF891A8MT65 544 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 ZEB2O60315 1214 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 MAFKO60675 156 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 GNAT1P11488 350 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 MCL1Q07820 350 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 STRN3Q13033 797 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 MTMR1Q13613 665 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 TMEM177Q53S58 311 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 CT47A1Q5JQC4 288 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 SPATS2Q86XZ4 545 aaKnown RBP6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 TTLL6Q8N841 843 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 IGSF22Q8N9C0 903 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 PHOSPHO1Q8TCT1 267 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 ZSWIM3Q96MP5 696 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 NGRNQ9NPE2 291 aaKnown RBP6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 RTEL1Q9NZ71 1219 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 CHPF2Q9P2E5 772 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 B4GALT6Q9UBX8 382 aa6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 APOBEC2Q9Y235 224 aaKnown RBP6.47□□□□□ -1.37
HMGB1P1-201ENST00000522557 FAM47E-STBD1D6RA91 191 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 ZNF561-AS1K7EIQ3 104 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 DDX3XO00571 662 aaKnown RBP eCLIP6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 NOBOXO60393 691 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 FOXD2O60548 495 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 RPL13P26373 211 aaKnown RBP6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 FLT3P36888 993 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 ID4P47928 161 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 LACTBP83111 547 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 SPIRE1Q08AE8 756 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 PAK1Q13153 545 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 TUSC3Q13454 348 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 NFIXQ14938 502 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 RTP5Q14D33 572 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 INAVAQ3KP66 663 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 PRR31Q5SQ13 230 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 CYP4F22Q6NT55 531 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 MTDHQ86UE4 582 aaKnown RBP6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 ZNF761Q86XN6 746 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 CHST14Q8NCH0 376 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 WDR66Q8TBY9 1149 aa6.46□□□□□ -1.38
HMGB1P1-201ENST00000522557 IFT22Q9H7X7 185 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms