RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 DPYDQ12882 1025 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 TRIM32Q13049 653 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 ACVR2BQ13705 512 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 HSDL1Q3SXM5 330 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 ZNF746Q6NUN9 644 aaPredicted RBP16.83■□□□□ 0.28
SREK1-209ENST00000520953 CCDC60Q8IWA6 550 aaPredicted RBP16.83■□□□□ 0.28
SREK1-209ENST00000520953 SOCS4Q8WXH5 440 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 POLD4Q9HCU8 107 aa16.83■□□□□ 0.28
SREK1-209ENST00000520953 LOC102724159A0A0B4J2E5 919 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 GSTTP1A0A1W2PQM5 241 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 MYMKA6NI61 221 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 IGHA2P01877 340 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 PLA2G4BP0C869 781 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 BMP6P22004 513 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 TYRO3Q06418 890 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 PWP2Q15269 919 aaKnown RBP16.82■□□□□ 0.28
SREK1-209ENST00000520953 ABHD15Q6UXT9 468 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 SCFD2Q8WU76 684 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 TRIB2Q92519 343 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 VTA1Q9NP79 307 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 USP25Q9UHP3 1055 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 ZNF862O60290 1169 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 SMPD1P17405 629 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 IRX5P78411 483 aaPredicted RBP16.82■□□□□ 0.28
SREK1-209ENST00000520953 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
SREK1-209ENST00000520953 RAD51AP2Q09MP3 1159 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 CCDC144BQ3MJ40 725 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 CELF3Q5SZQ8 465 aaKnown RBP16.82■□□□□ 0.28
SREK1-209ENST00000520953 SWSAP1Q6NVH7 229 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 ZNF296Q8WUU4 475 aaPredicted RBP16.82■□□□□ 0.28
SREK1-209ENST00000520953 BHMT2Q9H2M3 363 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 TUFT1Q9NNX1 390 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 SLC5A4Q9NY91 659 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 GABBR1Q9UBS5 961 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 STK17AQ9UEE5 414 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 TUBE1Q9UJT0 475 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 PCDHA10Q9Y5I2 948 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
SREK1-209ENST00000520953 TGFB3P10600 412 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 JAK3P52333 1124 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 SLC12A3P55017 1021 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 TTLL4Q14679 1199 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 METTL7BQ6UX53 244 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 DYMQ7RTS9 669 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 PCYT2Q99447 389 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 PYM1Q9BRP8 204 aaKnown RBP16.81■□□□□ 0.28
SREK1-209ENST00000520953 NT5C3AQ9H0P0 336 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 MLXIPQ9HAP2 919 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 TCEAL9Q9UHQ7 104 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 MAN1B1Q9UKM7 699 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 RBM47A0AV96 593 aaKnown RBP16.81■□□□□ 0.28
SREK1-209ENST00000520953 P4HBP07237 508 aaKnown RBP16.81■□□□□ 0.28
SREK1-209ENST00000520953 ZNF865P0CJ78 1059 aaPredicted RBP16.81■□□□□ 0.28
SREK1-209ENST00000520953 ELNP15502 786 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 SARSP49591 514 aaKnown RBP16.81■□□□□ 0.28
SREK1-209ENST00000520953 ARHGAP1Q07960 439 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 NEDD9Q14511 834 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 ARSHQ5FYA8 562 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 TRIM50Q86XT4 487 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 TRPV1Q8NER1 839 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 TRIM9Q9C026 710 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 ABHD16BQ9H3Z7 469 aa16.81■□□□□ 0.28
SREK1-209ENST00000520953 GTPBP6O43824 516 aaPredicted RBP16.8■□□□□ 0.28
SREK1-209ENST00000520953 SUPT20HL2P0C7V6 817 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 SFNP31947 248 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 QARSP47897 775 aaKnown RBP16.8■□□□□ 0.28
SREK1-209ENST00000520953 UVSSAQ2YD98 709 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 DPCR1Q3MIW9 517 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 UTP14CQ5TAP6 766 aaKnown RBP16.8■□□□□ 0.28
SREK1-209ENST00000520953 PLA2G4FQ68DD2 849 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 KANK3Q6NY19 840 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 C11orf57Q6ZUT1 292 aaPredicted RBP16.8■□□□□ 0.28
SREK1-209ENST00000520953 SV2BQ7L1I2 683 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
SREK1-209ENST00000520953 ELOA2Q8IYF1 753 aaPredicted RBP16.8■□□□□ 0.28
SREK1-209ENST00000520953 SPATA20Q8TB22 786 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 HPS3Q969F9 1004 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 SPATA33Q96N06 139 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 RUSC1Q9BVN2 902 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 DNM3Q9UQ16 869 aa16.8■□□□□ 0.28
SREK1-209ENST00000520953 KLRC4O43908 158 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 ATP4AP20648 1035 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 OLFML2BQ68BL8 750 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 SASS6Q6UVJ0 657 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 SMAP1Q8IYB5 467 aaPredicted RBP16.79■□□□□ 0.28
SREK1-209ENST00000520953 SMYD4Q8IYR2 804 aaPredicted RBP16.79■□□□□ 0.28
SREK1-209ENST00000520953 SMARCE1Q969G3 411 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 GPR20Q99678 358 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 DNAJC25Q9H1X3 360 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 CUEDC2Q9H467 287 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 BACH1O14867 736 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 STBD1O95210 358 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 ATG7O95352 703 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 CYP11B2P19099 503 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 CLCN1P35523 988 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 TCF7P36402 384 aaPredicted RBP16.79■□□□□ 0.28
SREK1-209ENST00000520953 ANO6Q4KMQ2 910 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 GPBP1Q86WP2 473 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 ZSWIM4Q9H7M6 989 aa16.79■□□□□ 0.28
SREK1-209ENST00000520953 BMP2KQ9NSY1 1161 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms