RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 NDUFB10O96000 172 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 CALM1P0DP23 149 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 CALM2P0DP24 149 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 CALM3P0DP25 149 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 RPL17P18621 184 aaKnown RBP3.24□□□□□ -1.89
EFR3A-202ENST00000519656 ALDH1A3P47895 512 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 DGKKQ5KSL6 1271 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 RARS2Q5T160 578 aaKnown RBP3.24□□□□□ -1.89
EFR3A-202ENST00000519656 CELF5Q8N6W0 485 aaKnown RBP3.24□□□□□ -1.89
EFR3A-202ENST00000519656 POF1BQ8WVV4 589 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 ZCCHC14Q8WYQ9 949 aaKnown RBP3.24□□□□□ -1.89
EFR3A-202ENST00000519656 APPBP2Q92624 585 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 SPACA7Q96KW9 195 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 NACC1Q96RE7 527 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 PRO3102Q9H379 93 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 AKAP7Q9P0M2 348 aaPredicted RBP3.24□□□□□ -1.89
EFR3A-202ENST00000519656 AKT3Q9Y243 479 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 FAN1Q9Y2M0 1017 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 PDE6AP16499 860 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 CXCL12P48061 93 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 KRT76Q01546 638 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 PSMD2Q13200 908 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 RNF43Q68DV7 783 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 ARMCX5Q6P1M9 558 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 PHLPP2Q6ZVD8 1323 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 SH3RF1Q7Z6J0 888 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 BICD2Q8TD16 824 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 NRCAMQ92823 1304 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 PLEKHA4Q9H4M7 779 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 TTC12Q9H892 705 aaPredicted RBP3.24□□□□□ -1.89
EFR3A-202ENST00000519656 ZSCAN32Q9NX65 697 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 WNT16Q9UBV4 365 aa3.24□□□□□ -1.89
EFR3A-202ENST00000519656 MRPS23Q9Y3D9 190 aaKnown RBP3.24□□□□□ -1.89
EFR3A-202ENST00000519656 LTN1O94822 1766 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 ATRNL1Q5VV63 1379 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 CPLX1O14810 134 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 KHNYNO15037 678 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 HBP1O60381 514 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 GHRP10912 638 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 NOVA1P51513 510 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 POLGP54098 1239 aaPredicted RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 RSPO4Q2I0M5 234 aaPredicted RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 SBK1Q52WX2 424 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 PLPP4Q5VZY2 271 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 MIS18BP1Q6P0N0 1132 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 DCLRE1AQ6PJP8 1040 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 LEMD2Q8NC56 503 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 TSC1Q92574 1164 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 ECHDC1Q9NTX5 307 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 FBXO4Q9UKT5 387 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 RBM19Q9Y4C8 960 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 LCHNA4D1U4 455 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 LINC01553A4QN01 128 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 J3QKU1 62 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 FIBPO43427 364 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 NR3C2P08235 984 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 SYPP08247 313 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 YARSP54577 528 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 UCNP55089 124 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 RRP1P56182 461 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 WDR5P61964 334 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 ARID5AQ03989 594 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 CSTF1Q05048 431 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 PLD1Q13393 1074 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 PLCB4Q15147 1175 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 PTPN14Q15678 1187 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 UAP1L1Q3KQV9 507 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 USP39Q53GS9 565 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 TNNI3KQ59H18 835 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 SLC45A4Q5BKX6 768 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 OTUD6AQ7L8S5 288 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 ZBTB8OSQ8IWT0 167 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 PAG1Q9NWQ8 432 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 USP15Q9Y4E8 981 aaPredicted RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 COBLO75128 1261 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 KLRK1P26718 216 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 MAP3K10Q02779 954 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 RABL6Q3YEC7 729 aaPredicted RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 SPECC1Q5M775 1068 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 NEDD1Q8NHV4 660 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 UPF3AQ9H1J1 476 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 BOLA2Q9H3K6 86 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 ARHGEF3Q9NR81 526 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 TUBE1Q9UJT0 475 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 LZTS1Q9Y250 596 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 INPP5FQ9Y2H2 1132 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 PCDHGA2Q9Y5H1 932 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 FASNP49327 2511 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 SDK1Q7Z5N4 2213 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 GVINP1Q7Z2Y8 2422 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 PER1O15534 1290 aaPredicted RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 GAS2O43903 313 aaKnown RBP3.23□□□□□ -1.89
EFR3A-202ENST00000519656 TADA2AO75478 443 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 FGF19O95750 216 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 ICAM1P05362 532 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 IL9P15248 144 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 PBX2P40425 430 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 FOXO4P98177 505 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 ANGPT1Q15389 498 aa3.23□□□□□ -1.89
EFR3A-202ENST00000519656 SAFBQ15424 915 aaKnown RBP eCLIP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms