RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
PABPC1-206ENST00000518293 SMURF1Q9HCE7 757 aa5.47□□□□□ -1.53
PABPC1-206ENST00000518293 CNOT11Q9UKZ1 510 aaKnown RBP5.47□□□□□ -1.53
PABPC1-206ENST00000518293 WASF3Q9UPY6 502 aa5.47□□□□□ -1.53
PABPC1-206ENST00000518293 CD2APQ9Y5K6 639 aa5.47□□□□□ -1.53
PABPC1-206ENST00000518293 A0A1B0GTL3 188 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 K7ESM1 405 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 ACOT7O00154 380 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 MAN2B1O00754 1011 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 GSTA4O15217 222 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 KRT15P19012 456 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 NKX3-2P78367 333 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 DLX2Q07687 328 aaPredicted RBP5.46□□□□□ -1.54
PABPC1-206ENST00000518293 CRY1Q16526 586 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 FAM47CQ5HY64 1035 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 OVCH1Q7RTY7 1134 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.46□□□□□ -1.54
PABPC1-206ENST00000518293 SAPCD2Q86UD0 394 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 ZC3H18Q86VM9 953 aaKnown RBP5.46□□□□□ -1.54
PABPC1-206ENST00000518293 PTRH1Q86Y79 214 aaKnown RBP5.46□□□□□ -1.54
PABPC1-206ENST00000518293 LINC00482Q8N8I6 264 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 TTLL11Q8NHH1 800 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 C11orf84Q9BUA3 381 aaPredicted RBP5.46□□□□□ -1.54
PABPC1-206ENST00000518293 CELF4Q9BZC1 486 aaKnown RBP5.46□□□□□ -1.54
PABPC1-206ENST00000518293 HSPBP1Q9NZL4 362 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 RBPJLQ9UBG7 517 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 SRPK3Q9UPE1 567 aa5.46□□□□□ -1.54
PABPC1-206ENST00000518293 TNPO3Q9Y5L0 923 aaKnown RBP5.46□□□□□ -1.54
PABPC1-206ENST00000518293 EIF4G3O43432 1585 aaKnown RBP5.46□□□□□ -1.54
PABPC1-206ENST00000518293 ARAP1Q96P48 1450 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 SH3D21A4FU49 640 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 FAM90A27PA6NNH2 459 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 KCNK3O14649 394 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 CDC45O75419 566 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 FAHP16930 419 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 ITGA1P56199 1179 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 ZNF460Q14592 562 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 PAN2Q504Q3 1202 aaKnown RBP5.45□□□□□ -1.54
PABPC1-206ENST00000518293 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 FERMT3Q86UX7 667 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 PROSER1Q86XN7 944 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 CISD2Q8N5K1 135 aaKnown RBP5.45□□□□□ -1.54
PABPC1-206ENST00000518293 IGSF22Q8N9C0 903 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 ZNF526Q8TF50 670 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-206ENST00000518293 ZBTB8AQ96BR9 441 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 GPR20Q99678 358 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 TMPRSS5Q9H3S3 457 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 NGRNQ9NPE2 291 aaKnown RBP5.45□□□□□ -1.54
PABPC1-206ENST00000518293 SPATA6Q9NWH7 488 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-206ENST00000518293 NUB1Q9Y5A7 615 aa5.45□□□□□ -1.54
PABPC1-206ENST00000518293 TOP2AP11388 1531 aaKnown RBP5.44□□□□□ -1.54
PABPC1-206ENST00000518293 ZNF608Q9ULD9 1512 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-206ENST00000518293 ENPP3O14638 875 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 ASLP04424 464 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 INSRRP14616 1297 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 IGFALSP35858 605 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 ADAM9Q13443 819 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 SMAD4Q13485 552 aaKnown RBP5.44□□□□□ -1.54
PABPC1-206ENST00000518293 SEC23AQ15436 765 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 ZNF827Q17R98 1081 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 ZCCHC8Q6NZY4 707 aaKnown RBP5.44□□□□□ -1.54
PABPC1-206ENST00000518293 HHIPL2Q6UWX4 724 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 KIAA0907Q7Z7F0 614 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-206ENST00000518293 NLGN4XQ8N0W4 816 aa5.44□□□□□ -1.54
PABPC1-206ENST00000518293 TOPBP1Q92547 1522 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 FAM83GA6ND36 823 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 OPA1O60313 960 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 GLRX3O76003 335 aaKnown RBP5.43□□□□□ -1.54
PABPC1-206ENST00000518293 NPTXRO95502 500 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 APPP05067 770 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 PTPN1P18031 435 aaKnown RBP5.43□□□□□ -1.54
PABPC1-206ENST00000518293 MECP2P51608 486 aaKnown RBP5.43□□□□□ -1.54
PABPC1-206ENST00000518293 GJA9P57773 515 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 PUM1Q14671 1186 aaKnown RBP eCLIP5.43□□□□□ -1.54
PABPC1-206ENST00000518293 TMEM177Q53S58 311 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 DALRD3Q5D0E6 543 aaKnown RBP5.43□□□□□ -1.54
PABPC1-206ENST00000518293 FIGNQ5HY92 759 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 BTBD8Q5XKL5 378 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 FSTL4Q6MZW2 842 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 CARFQ8N187 725 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 KYQ8NBH2 561 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 NINJ1Q92982 152 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 FEZ1Q99689 392 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 PCDH18Q9HCL0 1135 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 INTS7Q9NVH2 962 aaKnown RBP5.43□□□□□ -1.54
PABPC1-206ENST00000518293 SAMD15Q9P1V8 674 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 MYRFQ9Y2G1 1151 aa5.43□□□□□ -1.54
PABPC1-206ENST00000518293 SYNJ1O43426 1573 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 DNMBPQ6XZF7 1577 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.42□□□□□ -1.54
PABPC1-206ENST00000518293 B4E1Z4 1266 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 M0R2C6 588 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 CNR2P34972 360 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 THBS2P35442 1172 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 TM4SF20Q53R12 229 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 PLEKHG4Q58EX7 1191 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 CD276Q5ZPR3 534 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 TMC5Q6UXY8 1006 aa5.42□□□□□ -1.54
PABPC1-206ENST00000518293 DDX53Q86TM3 631 aaKnown RBP5.42□□□□□ -1.54
PABPC1-206ENST00000518293 NOSTRINQ8IVI9 506 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms