RNA–Protein interactions for RNA: ENST00000516538.1

RNU6-1046P-201, Transcript of RNA, U6 small nuclear 1046, pseudogene, humanhuman

BASIC

Gene RNU6-1046P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1046P-201ENST00000516538 KRT4P19013 534 aa4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 PTGS2P35354 604 aa4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 ETV4P43268 484 aa4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 TOP3AQ13472 1001 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 NCAPHQ15003 741 aa4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 SYCE2Q6PIF2 218 aa4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 D2HGDHQ8N465 521 aa4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 TRAIPQ9BWF2 469 aa4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 LRP2BPQ9P2M1 347 aa4.29□□□□□ -1.72
RNU6-1046P-201ENST00000516538 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 CDK4P11802 303 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 KRTAP10-11P60412 298 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 COL10A1Q03692 680 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 TUSC3Q13454 348 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 ZNF662Q6ZS27 426 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 BHLHA9Q7RTU4 235 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 GLCCI1Q86VQ1 547 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 PIP4K2CQ8TBX8 421 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 ZNHIT2Q9UHR6 403 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 FBXO10Q9UK96 956 aa4.28□□□□□ -1.72
RNU6-1046P-201ENST00000516538 A0A0A6YYK5 440 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 GCP02774 474 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 HMGCRP04035 888 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ITGB6P18564 788 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 CASP7P55210 303 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 CYP4F3Q08477 520 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 GRM7Q14831 915 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 WDR72Q3MJ13 1102 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 RPUSD2Q8IZ73 545 aaKnown RBP4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 CLEC4DQ8WXI8 215 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 RIOX1Q9H6W3 641 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 GINM1Q9NU53 330 aa4.27□□□□□ -1.73
RNU6-1046P-201ENST00000516538 MATN2O00339 956 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 IL18BPO95998 194 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 LMNAP02545 664 aaKnown RBP4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 LCP1P13796 627 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 CD38P28907 300 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 SOX9P48436 509 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 C21orf58P58505 322 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 SPIRE1Q08AE8 756 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 NOLC1Q14978 699 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ZNF394Q53GI3 561 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 Q6ZPA2 131 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 USP30Q70CQ3 517 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 PRIMA1Q86XR5 153 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 KREMEN2Q8NCW0 462 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 NRDE2Q9H7Z3 1164 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 EFR3BQ9Y2G0 817 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 PCDHGB7Q9Y5F8 929 aa4.26□□□□□ -1.73
RNU6-1046P-201ENST00000516538 GNAT1P11488 350 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 RRP1BQ14684 758 aaKnown RBP4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 PRSS53Q2L4Q9 553 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 EPHA10Q5JZY3 1008 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ERICH6Q7L0X2 663 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 OTOP3Q7RTS5 596 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ZNF227Q86WZ6 799 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ANKRD35Q8N283 1001 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 UHMK1Q8TAS1 419 aaKnown RBP4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 CPLX3Q8WVH0 158 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 MPHOSPH9Q99550 1183 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 BCL2L13Q9BXK5 485 aa4.25□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ARNTLO00327 626 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 RPS6KA4O75676 772 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 MEOX1P50221 254 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 CNGB1Q14028 1251 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 SV2CQ496J9 727 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 STRIP1Q5VSL9 837 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 GIPC2Q8TF65 315 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 HAS1Q92839 578 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 JAM3Q9BX67 310 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 LGR4Q9BXB1 951 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ZDHHC5Q9C0B5 715 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 PDGFDQ9GZP0 370 aaPredicted RBP4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 KIAA1683Q9H0B3 1180 aa4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 METTL5Q9NRN9 209 aaKnown RBP4.24□□□□□ -1.73
RNU6-1046P-201ENST00000516538 KCNQ1P51787 676 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 GFRA1P56159 465 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 KRTAP10-9P60411 292 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 SYNE4Q8N205 404 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 TMEM145Q8NBT3 493 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 SHCBP1Q8NEM2 672 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 CFHR4Q92496 578 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 TMEM176AQ96HP8 235 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 OR10A2Q9H208 303 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ARHGAP28Q9P2N2 729 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 DSEQ9UL01 958 aa4.23□□□□□ -1.73
RNU6-1046P-201ENST00000516538 ZAR1LA6NP61 321 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 TRAF5O00463 557 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 TBX1O43435 398 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 SLC26A4O43511 780 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 PPFIA4O75335 1185 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 LTFP02788 710 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 PDE6AP16499 860 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 PAK2Q13177 524 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 TBR1Q16650 682 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 KCTD1Q719H9 257 aa4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 CXXC5Q7LFL8 322 aaKnown RBP4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 RBM12BQ8IXT5 1001 aaKnown RBP4.22□□□□□ -1.73
RNU6-1046P-201ENST00000516538 RTKN2Q8IZC4 609 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms