RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 KREMEN2Q8NCW0 462 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 ATP8B4Q8TF62 1192 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 FAM227BQ96M60 508 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 APOL5Q9BWW9 433 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 HELLSQ9NRZ9 838 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 TELO2Q9Y4R8 837 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 DCHS1Q96JQ0 3298 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 TTC3P53804 2025 aa12.18□□□□□ -0.46
CLDND1-231ENST00000515620 MYH6P13533 1939 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 NRCAMQ92823 1304 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 PLXNA4Q9HCM2 1894 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
CLDND1-231ENST00000515620 CD52P31358 61 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 GNPTABQ3T906 1256 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 C20orf194Q5TEA3 1177 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 ZNF589Q86UQ0 364 aaPredicted RBP12.17□□□□□ -0.46
CLDND1-231ENST00000515620 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 DNAJB3Q8WWF6 145 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 RNF41Q9H4P4 317 aaPredicted RBP12.17□□□□□ -0.46
CLDND1-231ENST00000515620 AGO3Q9H9G7 860 aaKnown RBP12.17□□□□□ -0.46
CLDND1-231ENST00000515620 CDY2AQ9Y6F7 541 aa12.17□□□□□ -0.46
CLDND1-231ENST00000515620 FSD2A1L4K1 749 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
CLDND1-231ENST00000515620 BRD1O95696 1058 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 POLR2MP0CAP2 368 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 STAG3L1P0CL83 205 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 SRGAP2BP0DMP2 458 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 SCG2P13521 617 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 PPFIA1Q13136 1202 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 SEMA3FQ13275 785 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 NEDD9Q14511 834 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 DUSP6Q16828 381 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
CLDND1-231ENST00000515620 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 CRIPAKQ8N1N5 446 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 S1PR5Q9H228 398 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 SMOC2Q9H3U7 446 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 MAP3K20Q9NYL2 800 aaKnown RBP12.16□□□□□ -0.46
CLDND1-231ENST00000515620 TUBE1Q9UJT0 475 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 SORCS3Q9UPU3 1222 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 PCDHA1Q9Y5I3 950 aa12.16□□□□□ -0.46
CLDND1-231ENST00000515620 DOCK5Q9H7D0 1870 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 TECP42680 631 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 MRPS6P82932 125 aaKnown RBP12.15□□□□□ -0.46
CLDND1-231ENST00000515620 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
CLDND1-231ENST00000515620 UBE3AQ05086 875 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 GRIK4Q16099 956 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 MCMDC2Q4G0Z9 681 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 CCDC178Q5BJE1 867 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-231ENST00000515620 ANKRD54Q6NXT1 300 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 LLGL2Q6P1M3 1020 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 RTN4RL1Q86UN2 441 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-231ENST00000515620 UBALD2Q8IYN6 164 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 STAG2Q8N3U4 1231 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 ENAHQ8N8S7 591 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-231ENST00000515620 EVI5LQ96CN4 794 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 INPP4AQ96PE3 977 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-231ENST00000515620 ZSCAN10Q96SZ4 725 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-231ENST00000515620 CDCA3Q99618 268 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-231ENST00000515620 CDH22Q9UJ99 828 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 LRFN2Q9ULH4 789 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 NR2E1Q9Y466 385 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 PCDHB12Q9Y5F1 795 aa12.15□□□□□ -0.46
CLDND1-231ENST00000515620 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-231ENST00000515620 SPATA31C2B4DYI2 1134 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 ZBTB5O15062 677 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 FIBPO43427 364 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 FGF18O76093 207 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 MARK3P27448 753 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 TCF7P36402 384 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-231ENST00000515620 ERVFC1P60507 584 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-231ENST00000515620 PLPP4Q5VZY2 271 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 THNSL1Q8IYQ7 743 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 ZBTB10Q96DT7 871 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 FTHL17Q9BXU8 183 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-231ENST00000515620 MFSD1Q9H3U5 465 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 RTEL1Q9NZ71 1219 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 HCSTQ9UBK5 93 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 DMDP11532 3685 aa12.14□□□□□ -0.47
CLDND1-231ENST00000515620 FRMPD4Q14CM0 1322 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 MBLAC1A4D2B0 266 aaPredicted RBP12.13□□□□□ -0.47
CLDND1-231ENST00000515620 B4E1Z4 1266 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 C2CD4DB7Z1M9 353 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 STAM2O75886 525 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 IGBP1P78318 339 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 TMEM62Q0P6H9 643 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 APOBRQ0VD83 1088 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 PAK2Q13177 524 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 KCNC3Q14003 757 aa12.13□□□□□ -0.47
CLDND1-231ENST00000515620 MARCH8Q5T0T0 291 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms