RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 DHX8Q14562 1220 aaKnown RBP11.05□□□□□ -0.64
TPM3-221ENST00000513769 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
TPM3-221ENST00000513769 TMEM119Q4V9L6 283 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 TREML2Q5T2D2 321 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 GPAT2Q6NUI2 795 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 FOXR2Q6PJQ5 311 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 B3GNT9Q6UX72 402 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 DLK2Q6UY11 383 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 RNF214Q8ND24 703 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 SNX29Q8TEQ0 813 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 LARP4BQ92615 738 aaKnown RBP11.05□□□□□ -0.64
TPM3-221ENST00000513769 GPRASP2Q96D09 838 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 CLMNQ96JQ2 1002 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 SENP7Q9BQF6 1050 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 ZNF577Q9BSK1 485 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 SPATC1LQ9H0A9 340 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 KCNH7Q9NS40 1196 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 CYP39A1Q9NYL5 469 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 KCND2Q9NZV8 630 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 MYH7BA7E2Y1 1941 aa11.05□□□□□ -0.64
TPM3-221ENST00000513769 RLFQ13129 1914 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 DKC1O60832 514 aaKnown RBP eCLIP11.04□□□□□ -0.64
TPM3-221ENST00000513769 GAS7O60861 476 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 S1PR4O95977 384 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 ADH1BP00325 375 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 RPN1P04843 607 aaKnown RBP11.04□□□□□ -0.64
TPM3-221ENST00000513769 TPM3P06753 285 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 ITGB5P18084 799 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 PLCG1P19174 1290 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 SFNP31947 248 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 CCT6AP40227 531 aaKnown RBP11.04□□□□□ -0.64
TPM3-221ENST00000513769 MRPS9P82933 396 aaKnown RBP11.04□□□□□ -0.64
TPM3-221ENST00000513769 DGKZQ13574 1117 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 STXBP2Q15833 593 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 GNPTABQ3T906 1256 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 LRCH2Q5VUJ6 765 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 KCNV1Q6PIU1 500 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 NSMFQ6X4W1 530 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.04□□□□□ -0.64
TPM3-221ENST00000513769 CATSPER3Q86XQ3 398 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 ANKRD35Q8N283 1001 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 SYT2Q8N9I0 419 aaPredicted RBP11.04□□□□□ -0.64
TPM3-221ENST00000513769 GIMAP8Q8ND71 665 aaPredicted RBP11.04□□□□□ -0.64
TPM3-221ENST00000513769 CYP2W1Q8TAV3 490 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 RAD54LQ92698 747 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
TPM3-221ENST00000513769 CAPNS2Q96L46 248 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 PNMA5Q96PV4 448 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 NACC1Q96RE7 527 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 TEKT3Q9BXF9 490 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 TRIM9Q9C026 710 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 BLOC1S4Q9NUP1 217 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 RBPJLQ9UBG7 517 aa11.04□□□□□ -0.64
TPM3-221ENST00000513769 LRRC10BA6NIK2 292 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 DHX15O43143 795 aaKnown RBP11.03□□□□□ -0.64
TPM3-221ENST00000513769 SLITRK3O94933 977 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 KIF20AO95235 890 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 CELF2O95319 508 aaKnown RBP11.03□□□□□ -0.64
TPM3-221ENST00000513769 P4HBP07237 508 aaKnown RBP11.03□□□□□ -0.64
TPM3-221ENST00000513769 ICAM3P32942 547 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 MYL5Q02045 173 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 FMR1Q06787 632 aaKnown RBP eCLIP11.03□□□□□ -0.64
TPM3-221ENST00000513769 STIM1Q13586 685 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 MTMR1Q13613 665 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 CUL4BQ13620 913 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 PLS1Q14651 629 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 DPCR1Q3MIW9 517 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 SPRYD7Q5W111 196 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 CYP4F22Q6NT55 531 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 MOB2Q70IA6 237 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 LUZP1Q86V48 1076 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 DHX40Q8IX18 779 aaKnown RBP11.03□□□□□ -0.64
TPM3-221ENST00000513769 ABRAQ8N0Z2 381 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 WNK4Q96J92 1243 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 INPP4AQ96PE3 977 aaPredicted RBP11.03□□□□□ -0.64
TPM3-221ENST00000513769 AGO4Q9HCK5 861 aaKnown RBP11.03□□□□□ -0.64
TPM3-221ENST00000513769 A1CFQ9NQ94 594 aaKnown RBP11.03□□□□□ -0.64
TPM3-221ENST00000513769 BTBD7Q9P203 1132 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 COL20A1Q9P218 1284 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 KCNG1Q9UIX4 513 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 VAV3Q9UKW4 847 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 KIAA1024Q9UPX6 916 aa11.03□□□□□ -0.64
TPM3-221ENST00000513769 SMCHD1A6NHR9 2005 aa11.02□□□□□ -0.64
TPM3-221ENST00000513769 PP2D1A8MPX8 630 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 SPATA31C2B4DYI2 1134 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 BIN1O00499 593 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 LYPLA2O95372 231 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 EYA4O95677 639 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 SPATA31C1P0DKV0 1188 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 ARP10275 920 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 BMP6P22004 513 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 KRT76Q01546 638 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 MLLT1Q03111 559 aaPredicted RBP11.02□□□□□ -0.65
TPM3-221ENST00000513769 SPATA1Q5VX52 437 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 CST9Q5W186 159 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 UNC13DQ70J99 1090 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 SCUBE3Q8IX30 993 aa11.02□□□□□ -0.65
TPM3-221ENST00000513769 GPRC5AQ8NFJ5 357 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms