RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 NEK1Q96PY6 1258 aa12.18□□□□□ -0.46
CLDND1-227ENST00000513452 APOL5Q9BWW9 433 aa12.18□□□□□ -0.46
CLDND1-227ENST00000513452 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CLDND1-227ENST00000513452 HELLSQ9NRZ9 838 aa12.18□□□□□ -0.46
CLDND1-227ENST00000513452 TELO2Q9Y4R8 837 aa12.18□□□□□ -0.46
CLDND1-227ENST00000513452 DCHS1Q96JQ0 3298 aa12.18□□□□□ -0.46
CLDND1-227ENST00000513452 TTC3P53804 2025 aa12.18□□□□□ -0.46
CLDND1-227ENST00000513452 MYH6P13533 1939 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 NRCAMQ92823 1304 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 PLXNA4Q9HCM2 1894 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
CLDND1-227ENST00000513452 CD52P31358 61 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 GNPTABQ3T906 1256 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 C20orf194Q5TEA3 1177 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 ZNF589Q86UQ0 364 aaPredicted RBP12.17□□□□□ -0.46
CLDND1-227ENST00000513452 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 DNAJB3Q8WWF6 145 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 RNF41Q9H4P4 317 aaPredicted RBP12.17□□□□□ -0.46
CLDND1-227ENST00000513452 AGO3Q9H9G7 860 aaKnown RBP12.17□□□□□ -0.46
CLDND1-227ENST00000513452 CDY2AQ9Y6F7 541 aa12.17□□□□□ -0.46
CLDND1-227ENST00000513452 FSD2A1L4K1 749 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 GCOM1H8Y6P7 765 aaPredicted RBP12.16□□□□□ -0.46
CLDND1-227ENST00000513452 BRD1O95696 1058 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 POLR2MP0CAP2 368 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 STAG3L1P0CL83 205 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 SRGAP2BP0DMP2 458 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 SCG2P13521 617 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 PPFIA1Q13136 1202 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 SEMA3FQ13275 785 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 NEDD9Q14511 834 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 DUSP6Q16828 381 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 SPOUT1Q5T280 376 aaKnown RBP12.16□□□□□ -0.46
CLDND1-227ENST00000513452 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 CRIPAKQ8N1N5 446 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 S1PR5Q9H228 398 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 SMOC2Q9H3U7 446 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 MAP3K20Q9NYL2 800 aaKnown RBP12.16□□□□□ -0.46
CLDND1-227ENST00000513452 TUBE1Q9UJT0 475 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 SORCS3Q9UPU3 1222 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 PCDHA1Q9Y5I3 950 aa12.16□□□□□ -0.46
CLDND1-227ENST00000513452 DOCK5Q9H7D0 1870 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 TECP42680 631 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 MRPS6P82932 125 aaKnown RBP12.15□□□□□ -0.46
CLDND1-227ENST00000513452 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
CLDND1-227ENST00000513452 UBE3AQ05086 875 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 GRIK4Q16099 956 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 MCMDC2Q4G0Z9 681 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 CCDC178Q5BJE1 867 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-227ENST00000513452 ANKRD54Q6NXT1 300 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 LLGL2Q6P1M3 1020 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 RTN4RL1Q86UN2 441 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-227ENST00000513452 UBALD2Q8IYN6 164 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 STAG2Q8N3U4 1231 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 ENAHQ8N8S7 591 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-227ENST00000513452 EVI5LQ96CN4 794 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 INPP4AQ96PE3 977 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-227ENST00000513452 ZSCAN10Q96SZ4 725 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-227ENST00000513452 CDCA3Q99618 268 aaPredicted RBP12.15□□□□□ -0.46
CLDND1-227ENST00000513452 CDH22Q9UJ99 828 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 LRFN2Q9ULH4 789 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 NR2E1Q9Y466 385 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 PCDHB12Q9Y5F1 795 aa12.15□□□□□ -0.46
CLDND1-227ENST00000513452 MED19A0JLT2 244 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-227ENST00000513452 SPATA31C2B4DYI2 1134 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 ZBTB5O15062 677 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 FIBPO43427 364 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 FGF18O76093 207 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 MARK3P27448 753 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 TCF7P36402 384 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-227ENST00000513452 ERVFC1P60507 584 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 NMIQ13287 307 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-227ENST00000513452 PLPP4Q5VZY2 271 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 THNSL1Q8IYQ7 743 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 ZBTB10Q96DT7 871 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 FTHL17Q9BXU8 183 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 FAM49AQ9H0Q0 323 aaPredicted RBP12.14□□□□□ -0.47
CLDND1-227ENST00000513452 MFSD1Q9H3U5 465 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 RTEL1Q9NZ71 1219 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 HCSTQ9UBK5 93 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 DMDP11532 3685 aa12.14□□□□□ -0.47
CLDND1-227ENST00000513452 FRMPD4Q14CM0 1322 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 MBLAC1A4D2B0 266 aaPredicted RBP12.13□□□□□ -0.47
CLDND1-227ENST00000513452 B4E1Z4 1266 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 C2CD4DB7Z1M9 353 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 KLRF2D3W0D1 207 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 STAM2O75886 525 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 IGBP1P78318 339 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 TMEM62Q0P6H9 643 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 APOBRQ0VD83 1088 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 PAK2Q13177 524 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 KCNC3Q14003 757 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 MARCH8Q5T0T0 291 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 SAMD3Q8N6K7 520 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
CLDND1-227ENST00000513452 AAASQ9NRG9 546 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms