RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, human

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YIPF3-215	ENST00000511831	PKN1	Q16512	942 aa		11.92	□□□□□ -0.5
YIPF3-215	ENST00000511831	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.92	□□□□□ -0.5
YIPF3-215	ENST00000511831	P2RX5	Q93086	422 aa		11.92	□□□□□ -0.5
YIPF3-215	ENST00000511831	PPP2R3C	Q969Q6	453 aa		11.92	□□□□□ -0.5
YIPF3-215	ENST00000511831	INPP4A	Q96PE3	977 aa	Predicted RBP	11.92	□□□□□ -0.5
YIPF3-215	ENST00000511831	HCST	Q9UBK5	93 aa		11.92	□□□□□ -0.5
YIPF3-215	ENST00000511831	MAD2L2	Q9UI95	211 aa		11.92	□□□□□ -0.5
YIPF3-215	ENST00000511831	TTC3	P53804	2025 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	SPATA31C2	B4DYI2	1134 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	ICAM3	P32942	547 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	IGBP1	P78318	339 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	TMEM62	Q0P6H9	643 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	NEDD9	Q14511	834 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	GRIK4	Q16099	956 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	PTPN21	Q16825	1174 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	GNPTAB	Q3T906	1256 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	CCDC178	Q5BJE1	867 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	IFIT1B	Q5T764	474 aa	Known RBP	11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	TSHZ1	Q6ZSZ6	1077 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	CMTR2	Q8IYT2	770 aa	Known RBP	11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	TLE6	Q9H808	572 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	CDH22	Q9UJ99	828 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	TUBE1	Q9UJT0	475 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	PLXNA4	Q9HCM2	1894 aa		11.91	□□□□□ -0.5
YIPF3-215	ENST00000511831	FRMPD4	Q14CM0	1322 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	NRCAM	Q92823	1304 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	FIBP	O43427	364 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	PTPRZ1	P23471	2315 aa	Predicted RBP	11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	TCF7	P36402	384 aa	Predicted RBP	11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	MRPS6	P82932	125 aa	Known RBP	11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	MARCH8	Q5T0T0	291 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	ZBTB33	Q86T24	672 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	NPAS4	Q8IUM7	802 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	MICAL1	Q8TDZ2	1067 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	UBAC1	Q9BSL1	405 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	SMOC2	Q9H3U7	446 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	MAP3K20	Q9NYL2	800 aa	Known RBP	11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	PKD2L1	Q9P0L9	805 aa		11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.9	□□□□□ -0.5
YIPF3-215	ENST00000511831	VPS13A	Q96RL7	3174 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	PALM3	A6NDB9	673 aa	Predicted RBP	11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	CYTH3	O43739	400 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	SDS	P20132	328 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	APOBR	Q0VD83	1088 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	SEC23A	Q15436	765 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	SPOUT1	Q5T280	376 aa	Known RBP	11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	LLGL2	Q6P1M3	1020 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	TAF2	Q6P1X5	1199 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	CYB5R4	Q7L1T6	521 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	RSPH3	Q86UC2	560 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	CRIPAK	Q8N1N5	446 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	SUSD6	Q92537	303 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	SENP2	Q9HC62	589 aa		11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.89	□□□□□ -0.51
YIPF3-215	ENST00000511831	DCHS1	Q96JQ0	3298 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	GSTTP1	A0A1W2PQM5	241 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	PRR23A	A6NEV1	266 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	GALR2	O43603	387 aa	Predicted RBP	11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	ATP9A	O75110	1047 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	SCG2	P13521	617 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	ERVFC1	P60507	584 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	DUSP6	Q16828	381 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	TMEM266	Q2M3C6	531 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	NAALADL2	Q58DX5	795 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	PLPP4	Q5VZY2	271 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	CWC27	Q6UX04	472 aa	Known RBP	11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	SAMD3	Q8N6K7	520 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	ATP8B4	Q8TF62	1192 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	TRAPPC12	Q8WVT3	735 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	LNPK	Q9C0E8	428 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	TSHZ2	Q9NRE2	1034 aa		11.88	□□□□□ -0.51
YIPF3-215	ENST00000511831	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	MGEA5	O60502	916 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	ATF7	P17544	494 aa	Predicted RBP	11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	TEC	P42680	631 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	MFAP1	P55081	439 aa	Known RBP	11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	PAK2	Q13177	524 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	GRM4	Q14833	912 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	USP17L6P	Q6QN14	398 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	TMEM105	Q8N8V8	129 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	KREMEN2	Q8NCW0	462 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	GLG1	Q92896	1179 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	RIPOR3	Q96MK2	946 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	NEK1	Q96PY6	1258 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	S1PR5	Q9H228	398 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	TMX1	Q9H3N1	280 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	RIOX1	Q9H6W3	641 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	LRFN2	Q9ULH4	789 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	PADI3	Q9ULW8	664 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	TRPV2	Q9Y5S1	764 aa		11.87	□□□□□ -0.51
YIPF3-215	ENST00000511831	RIF1	Q5UIP0	2472 aa	Known RBP	11.86	□□□□□ -0.51
YIPF3-215	ENST00000511831	KAT6A	Q92794	2004 aa		11.86	□□□□□ -0.51
YIPF3-215	ENST00000511831	PNMA6F	A0A0J9YX94	578 aa		11.86	□□□□□ -0.51
YIPF3-215	ENST00000511831	TBKBP1	A7MCY6	615 aa		11.86	□□□□□ -0.51
YIPF3-215	ENST00000511831	STAM2	O75886	525 aa		11.86	□□□□□ -0.51
YIPF3-215	ENST00000511831	FGF18	O76093	207 aa		11.86	□□□□□ -0.51
YIPF3-215	ENST00000511831	STAG3L1	P0CL83	205 aa		11.86	□□□□□ -0.51
YIPF3-215	ENST00000511831	AR	P10275	920 aa		11.86	□□□□□ -0.51
YIPF3-215	ENST00000511831	KCNA2	P16389	499 aa		11.86	□□□□□ -0.51

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