RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 KCNMB3Q9NPA1 279 aa18.5■□□□□ 0.55
SKP2-205ENST00000509692 TBX3O15119 743 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 MARCH6O60337 910 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 CSF2RAP15509 400 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 NUCB2P80303 420 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 CALCRLQ16602 461 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 SLC5A5Q92911 643 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 GJA10Q969M2 543 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 WNT8AQ9H1J5 351 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.49■□□□□ 0.55
SKP2-205ENST00000509692 TBC1D22BQ9NU19 505 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 GTF2IRD1Q9UHL9 959 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 H3BRB1 525 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 DHX15O43143 795 aaKnown RBP18.49■□□□□ 0.55
SKP2-205ENST00000509692 BAG4O95429 457 aaKnown RBP18.49■□□□□ 0.55
SKP2-205ENST00000509692 CCL23P55773 120 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 HIC1Q14526 733 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 PTGISQ16647 500 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 LRIT3Q3SXY7 679 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 C16orf59Q7L2K0 433 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 TRIM50Q86XT4 487 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 C7orf31Q8N865 590 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 HAS1Q92839 578 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 LRCH3Q96II8 777 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 FAM20AQ96MK3 541 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 TMEM60Q9H2L4 133 aa18.49■□□□□ 0.55
SKP2-205ENST00000509692 TUT1Q9H6E5 874 aaKnown RBP18.49■□□□□ 0.55
SKP2-205ENST00000509692 JPH1Q9HDC5 661 aaPredicted RBP18.49■□□□□ 0.55
SKP2-205ENST00000509692 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
SKP2-205ENST00000509692 DDX39AO00148 427 aaKnown RBP18.48■□□□□ 0.55
SKP2-205ENST00000509692 UTP14CQ5TAP6 766 aaKnown RBP18.48■□□□□ 0.55
SKP2-205ENST00000509692 LRCH2Q5VUJ6 765 aa18.48■□□□□ 0.55
SKP2-205ENST00000509692 SLFN12Q8IYM2 578 aa18.48■□□□□ 0.55
SKP2-205ENST00000509692 TMEM199Q8N511 208 aa18.48■□□□□ 0.55
SKP2-205ENST00000509692 MTMR9Q96QG7 549 aa18.48■□□□□ 0.55
SKP2-205ENST00000509692 RIT2Q99578 217 aa18.48■□□□□ 0.55
SKP2-205ENST00000509692 SLC9A2Q9UBY0 812 aa18.48■□□□□ 0.55
SKP2-205ENST00000509692 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
SKP2-205ENST00000509692 SCN5AQ14524 2016 aa18.47■□□□□ 0.55
SKP2-205ENST00000509692 GAS7O60861 476 aa18.47■□□□□ 0.55
SKP2-205ENST00000509692 TCF7P36402 384 aaPredicted RBP18.47■□□□□ 0.55
SKP2-205ENST00000509692 ZNF200P98182 395 aaPredicted RBP18.47■□□□□ 0.55
SKP2-205ENST00000509692 PTGDRQ13258 359 aa18.47■□□□□ 0.55
SKP2-205ENST00000509692 C4orf32Q8N8J7 132 aa18.47■□□□□ 0.55
SKP2-205ENST00000509692 SCLYQ96I15 445 aa18.47■□□□□ 0.55
SKP2-205ENST00000509692 TEKT3Q9BXF9 490 aa18.47■□□□□ 0.55
SKP2-205ENST00000509692 PSMD10O75832 226 aa18.46■□□□□ 0.55
SKP2-205ENST00000509692 OR52Z1P0C646 297 aa18.46■□□□□ 0.55
SKP2-205ENST00000509692 ACRP10323 421 aa18.46■□□□□ 0.55
SKP2-205ENST00000509692 PPIGQ13427 754 aaKnown RBP eCLIP18.46■□□□□ 0.55
SKP2-205ENST00000509692 SF3A1Q15459 793 aaKnown RBP18.46■□□□□ 0.55
SKP2-205ENST00000509692 FOXD4L6Q3SYB3 417 aaPredicted RBP18.46■□□□□ 0.55
SKP2-205ENST00000509692 FOXD4L3Q6VB84 417 aaPredicted RBP18.46■□□□□ 0.55
SKP2-205ENST00000509692 SEPT1Q8WYJ6 367 aa18.46■□□□□ 0.55
SKP2-205ENST00000509692 VWCEQ96DN2 955 aa18.46■□□□□ 0.55
SKP2-205ENST00000509692 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.46■□□□□ 0.552e-6■■■■□ 19.8
SKP2-205ENST00000509692 TCEAL9Q9UHQ7 104 aa18.46■□□□□ 0.55
SKP2-205ENST00000509692 NOD1Q9Y239 953 aa18.46■□□□□ 0.55
SKP2-205ENST00000509692 COL6A3P12111 3177 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 TXKP42681 527 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 DHX38Q92620 1227 aaKnown RBP18.45■□□□□ 0.54
SKP2-205ENST00000509692 ZNF396Q96N95 335 aaPredicted RBP18.45■□□□□ 0.54
SKP2-205ENST00000509692 FTOQ9C0B1 505 aaKnown RBP eCLIP18.45■□□□□ 0.54
SKP2-205ENST00000509692 CEP131Q9UPN4 1083 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 CLIC4Q9Y696 253 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 KAT6AQ92794 2004 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 WDR81Q562E7 1941 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 LAD1O00515 517 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 CCNE2O96020 404 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 KRT76Q01546 638 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 TMEM240Q5SV17 173 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 USP28Q96RU2 1077 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 RNPEPQ9H4A4 650 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 IL23AQ9NPF7 189 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 PCDHA12Q9UN75 941 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 ATP6V1DQ9Y5K8 247 aa18.45■□□□□ 0.54
SKP2-205ENST00000509692 TCHHQ07283 1943 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 TET1Q8NFU7 2136 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 PITPNM1O00562 1244 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 BMP15O95972 392 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 SMIM10L2AP0DMW4 78 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 SMIM10L2BP0DMW5 78 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 HOXC8P31273 242 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 ACTR2P61160 394 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 ATP2C1P98194 919 aaPredicted RBP18.44■□□□□ 0.54
SKP2-205ENST00000509692 CEBPZQ03701 1054 aaKnown RBP18.44■□□□□ 0.54
SKP2-205ENST00000509692 ZNF746Q6NUN9 644 aaPredicted RBP18.44■□□□□ 0.54
SKP2-205ENST00000509692 WNT8BQ93098 351 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 PCYT2Q99447 389 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 UNC45AQ9H3U1 944 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 TTC12Q9H892 705 aaPredicted RBP18.44■□□□□ 0.54
SKP2-205ENST00000509692 CHMP5Q9NZZ3 219 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 TFIP11Q9UBB9 837 aaKnown RBP18.44■□□□□ 0.54
SKP2-205ENST00000509692 VAV3Q9UKW4 847 aa18.44■□□□□ 0.54
SKP2-205ENST00000509692 TANC1Q9C0D5 1861 aa18.43■□□□□ 0.54
SKP2-205ENST00000509692 CHMP2AO43633 222 aa18.43■□□□□ 0.54
SKP2-205ENST00000509692 PPP2R5CQ13362 524 aa18.43■□□□□ 0.54
SKP2-205ENST00000509692 BFSP2Q13515 415 aa18.43■□□□□ 0.54
SKP2-205ENST00000509692 B3GNT9Q6UX72 402 aa18.43■□□□□ 0.54
SKP2-205ENST00000509692 ZNF365Q70YC5 407 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms