RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 XIRP2A4UGR9 3374 aa16.67■□□□□ 0.26
HMGCL-208ENST00000509389 PFKFB2O60825 505 aa16.67■□□□□ 0.26
HMGCL-208ENST00000509389 TCF7P36402 384 aaPredicted RBP16.67■□□□□ 0.26
HMGCL-208ENST00000509389 RCAN1P53805 252 aa16.67■□□□□ 0.26
HMGCL-208ENST00000509389 HTRA4P83105 476 aaPredicted RBP16.67■□□□□ 0.26
HMGCL-208ENST00000509389 FAM26DQ5JW98 314 aa16.67■□□□□ 0.26
HMGCL-208ENST00000509389 CDHR1Q96JP9 859 aa16.67■□□□□ 0.26
HMGCL-208ENST00000509389 UBIAD1Q9Y5Z9 338 aa16.67■□□□□ 0.26
HMGCL-208ENST00000509389 MYH15Q9Y2K3 1946 aa16.67■□□□□ 0.26
HMGCL-208ENST00000509389 NRCAMQ92823 1304 aa16.67■□□□□ 0.26
HMGCL-208ENST00000509389 GSTTP1A0A1W2PQM5 241 aa16.66■□□□□ 0.26
HMGCL-208ENST00000509389 MICU3Q86XE3 530 aa16.66■□□□□ 0.26
HMGCL-208ENST00000509389 SP7Q8TDD2 431 aaPredicted RBP16.66■□□□□ 0.26
HMGCL-208ENST00000509389 SEPT1Q8WYJ6 367 aa16.66■□□□□ 0.26
HMGCL-208ENST00000509389 C17orf80Q9BSJ5 609 aa16.66■□□□□ 0.26
HMGCL-208ENST00000509389 PCDHA6Q9UN73 950 aa16.66■□□□□ 0.26
HMGCL-208ENST00000509389 PCDHA8Q9Y5H6 950 aa16.66■□□□□ 0.26
HMGCL-208ENST00000509389 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.65■□□□□ 0.26
HMGCL-208ENST00000509389 SPDYE3A6NKU9 549 aa16.65■□□□□ 0.26
HMGCL-208ENST00000509389 MTMR1Q13613 665 aa16.65■□□□□ 0.26
HMGCL-208ENST00000509389 RUFY4Q6ZNE9 571 aa16.65■□□□□ 0.26
HMGCL-208ENST00000509389 HEATR3Q7Z4Q2 680 aa16.65■□□□□ 0.26
HMGCL-208ENST00000509389 FBXO22Q8NEZ5 403 aa16.65■□□□□ 0.26
HMGCL-208ENST00000509389 TOP1MTQ969P6 601 aa16.65■□□□□ 0.26
HMGCL-208ENST00000509389 JADE2Q9NQC1 790 aa16.65■□□□□ 0.26
HMGCL-208ENST00000509389 PKD2L1Q9P0L9 805 aa16.65■□□□□ 0.26
HMGCL-208ENST00000509389 UPP2O95045 317 aa16.64■□□□□ 0.26
HMGCL-208ENST00000509389 CHRNA1P02708 482 aa16.64■□□□□ 0.26
HMGCL-208ENST00000509389 PDIA3P30101 505 aaKnown RBP16.64■□□□□ 0.26
HMGCL-208ENST00000509389 APOBRQ0VD83 1088 aa16.64■□□□□ 0.26
HMGCL-208ENST00000509389 APOA5Q6Q788 366 aa16.64■□□□□ 0.26
HMGCL-208ENST00000509389 SYNE3Q6ZMZ3 975 aa16.64■□□□□ 0.26
HMGCL-208ENST00000509389 RPAINQ86UA6 219 aa16.64■□□□□ 0.26
HMGCL-208ENST00000509389 APBB2Q92870 758 aa16.64■□□□□ 0.26
HMGCL-208ENST00000509389 LARP6Q9BRS8 491 aaKnown RBP16.64■□□□□ 0.26
HMGCL-208ENST00000509389 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.26
HMGCL-208ENST00000509389 CNTNAP5Q8WYK1 1306 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 MAFGO15525 162 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 MARK3P27448 753 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 SCRN1Q12765 414 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 PPFIA1Q13136 1202 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 WWC2Q6AWC2 1192 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 TAF2Q6P1X5 1199 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 GLG1Q92896 1179 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 YME1L1Q96TA2 773 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 IFIH1Q9BYX4 1025 aaKnown RBP16.64■□□□□ 0.25
HMGCL-208ENST00000509389 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
HMGCL-208ENST00000509389 SMARCAD1Q9H4L7 1026 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 ERAP1Q9NZ08 941 aa16.64■□□□□ 0.25
HMGCL-208ENST00000509389 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
HMGCL-208ENST00000509389 NLRC5Q86WI3 1866 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 COL9A1P20849 921 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 MGAT3Q09327 533 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 GRIK4Q16099 956 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 EPC2Q52LR7 807 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 MARCH8Q5T0T0 291 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 TYW1BQ6NUM6 668 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 CCDC83Q8IWF9 413 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 SAMD11Q96NU1 681 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 MXRA8Q9BRK3 442 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 LLPHQ9BRT6 129 aaKnown RBP16.63■□□□□ 0.25
HMGCL-208ENST00000509389 EHMT1Q9H9B1 1298 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 RBM28Q9NW13 759 aaKnown RBP16.63■□□□□ 0.25
HMGCL-208ENST00000509389 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
HMGCL-208ENST00000509389 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 MBLAC1A4D2B0 266 aaPredicted RBP16.62■□□□□ 0.25
HMGCL-208ENST00000509389 HSP90AA1P07900 732 aaKnown RBP16.62■□□□□ 0.25
HMGCL-208ENST00000509389 GHRP10912 638 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 NAPAP54920 295 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 FUT2Q10981 343 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 NECAB1Q8N987 351 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 CYP2W1Q8TAV3 490 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 PCYT2Q99447 389 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 JPH1Q9HDC5 661 aaPredicted RBP16.62■□□□□ 0.25
HMGCL-208ENST00000509389 RIC8AQ9NPQ8 531 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 KCNH7Q9NS40 1196 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 TUBE1Q9UJT0 475 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 COL4A6Q14031 1691 aa16.62■□□□□ 0.25
HMGCL-208ENST00000509389 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.61■□□□□ 0.25
HMGCL-208ENST00000509389 ZBTB43O43298 467 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 FGD1P98174 961 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 LPIN1Q14693 890 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 RTN1Q16799 776 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 PPP1R18Q6NYC8 613 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 RSPH3Q86UC2 560 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 DNAJB3Q8WWF6 145 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 MRPL38Q96DV4 380 aaKnown RBP16.61■□□□□ 0.25
HMGCL-208ENST00000509389 PGBD1Q96JS3 809 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 UBE2ZQ9H832 354 aaPredicted RBP16.61■□□□□ 0.25
HMGCL-208ENST00000509389 SLC9A2Q9UBY0 812 aa16.61■□□□□ 0.25
HMGCL-208ENST00000509389 V9GY48 417 aaPredicted RBP16.61■□□□□ 0.25
HMGCL-208ENST00000509389 RALGAPA2Q2PPJ7 1873 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 H3BNC9 293 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 CTDNEP1O95476 244 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 INSRRP14616 1297 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 ADCY7P51828 1080 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 IGBP1P78318 339 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 TMEM192Q8IY95 271 aa16.6■□□□□ 0.25
HMGCL-208ENST00000509389 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms