RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 BMP4P12644 408 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 ALAS1P13196 640 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 POU3F3P20264 500 aaPredicted RBP10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 FGFR3P22607 806 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 PTGS1P23219 599 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 LORP23490 312 aaPredicted RBP10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 PPARAQ07869 468 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 PWP2Q15269 919 aaKnown RBP10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 HIF1AQ16665 826 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 DUSP28Q4G0W2 176 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 C20orf194Q5TEA3 1177 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 TSHZ3Q63HK5 1081 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 OTOP2Q7RTS6 562 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 STAG2Q8N3U4 1231 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 ABHD17AQ96GS6 310 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 GPATCH3Q96I76 525 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 SEC62Q99442 399 aaKnown RBP10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 WNT8AQ9H1J5 351 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 SLC28A3Q9HAS3 691 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 VTA1Q9NP79 307 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 PRR12Q9ULL5 1215 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 PCDHA11Q9Y5I1 949 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 LRRC37A2A6NM11 1700 aa10.18□□□□□ -0.78
COL4A3BP-206ENST00000508809 TRIP12Q14669 1992 aaPredicted RBP10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 RBM47A0AV96 593 aaKnown RBP10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 THBS1P07996 1170 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 FGRP09769 529 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 IGFBP4P22692 258 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 CCL23P55773 120 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 CCDC85BQ15834 202 aaPredicted RBP10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 MUM1L1Q5H9M0 696 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 ZMYM1Q5SVZ6 1142 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 BTNL9Q6UXG8 535 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 KIAA1211Q6ZU35 1233 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 KCTD1Q719H9 257 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 FBXO16Q8IX29 292 aaPredicted RBP10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 NAPBQ9H115 298 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 ALDH8A1Q9H2A2 487 aaPredicted RBP10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 RCAN3Q9UKA8 241 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 NOVA2Q9UNW9 492 aaKnown RBP10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 SLC4A7Q9Y6M7 1214 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 DDX49Q9Y6V7 483 aaKnown RBP10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 SCN5AQ14524 2016 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 BRWD1Q9NSI6 2320 aa10.17□□□□□ -0.78
COL4A3BP-206ENST00000508809 TTC41PQ6P2S7 1318 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 KHNYNO15037 678 aaKnown RBP10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 FOXP2O15409 715 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 ICAM1P05362 532 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 PFKMP08237 780 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 SUPT20HL2P0C7V6 817 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 RABGGTBP53611 331 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 PSMC6P62333 389 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 SAMD5Q5TGI4 173 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 ZNF385CQ66K41 422 aaPredicted RBP10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 EEPD1Q7L9B9 569 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 UHRF1Q96T88 793 aaPredicted RBP10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 PHACTR1Q9C0D0 580 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 RANBP17Q9H2T7 1088 aaKnown RBP10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 ANAPC4Q9UJX5 808 aa10.16□□□□□ -0.78
COL4A3BP-206ENST00000508809 DCDC2BA2VCK2 349 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 ERC2O15083 957 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 BNIP3LO60238 219 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 NMT2O60551 498 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 FAM157BP0CG42 384 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 MYOGP15173 224 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 ATP2A2P16615 1042 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 SNAP25P60880 206 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 PURAQ00577 322 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 IKQ13123 557 aaPredicted RBP10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 BAATQ14032 418 aaPredicted RBP10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 UBAP2LQ14157 1087 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 DCAF4Q8WV16 495 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 SCLYQ96I15 445 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 WDR11Q9BZH6 1224 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 INCENPQ9NQS7 918 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 TRMT13Q9NUP7 481 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 ADD3Q9UEY8 706 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 CCPG1Q9ULG6 757 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 STX8Q9UNK0 236 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 HCN4Q9Y3Q4 1203 aa10.15□□□□□ -0.78
COL4A3BP-206ENST00000508809 TNKSO95271 1327 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 TSPY2A6NKD2 308 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 ORC4O43929 436 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 ALDH5A1P51649 535 aaPredicted RBP10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 TTLL4Q14679 1199 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 ALX1Q15699 326 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 TMEM67Q5HYA8 995 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 TTBK2Q6IQ55 1244 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 NSMFQ6X4W1 530 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 LRRC69Q6ZNQ3 347 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 PHOSPHO2Q8TCD6 241 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 PBXIP1Q96AQ6 731 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 OXCT2Q9BYC2 517 aaPredicted RBP10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 NDFIP2Q9NV92 336 aa10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 GDF2Q9UK05 429 aaPredicted RBP10.14□□□□□ -0.79
COL4A3BP-206ENST00000508809 ISY1Q9ULR0 285 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms