RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 PDILTQ8N807 584 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ZNF296Q8WUU4 475 aaPredicted RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 CUL5Q93034 780 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CRBNQ96SW2 442 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PARD6BQ9BYG5 372 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CNNM2Q9H8M5 875 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ZWILCHQ9H900 591 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SPC25Q9HBM1 224 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SPATS2LQ9NUQ6 558 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 MKS1Q9NXB0 559 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CWC15Q9P013 229 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 NDOR1Q9UHB4 597 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SRPK3Q9UPE1 567 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CORO2BQ9UQ03 480 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 JAG2Q9Y219 1238 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CLRN2A0PK11 232 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 KRT38O76015 456 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PGRP06401 933 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ALAS1P13196 640 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 OSMP13725 252 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CD9P21926 228 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CNTFP26441 200 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 VEGFBP49765 207 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CDK17Q00537 523 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 RIPK1Q13546 671 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SARM1Q6SZW1 724 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SAPCD2Q86UD0 394 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 RETREG3Q86VR2 466 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 HEATR4Q86WZ0 1026 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 FAM160A2Q8N612 972 aaPredicted RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 CTCFLQ8NI51 663 aaPredicted RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 CDC6Q99741 560 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SH3GL2Q99962 352 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 NACA2Q9H009 215 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 USP44Q9H0E7 712 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 DISC1Q9NRI5 854 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ZNF215Q9UL58 517 aaPredicted RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 KIAA1671Q9BY89 1806 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 NAV1Q8NEY1 1877 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ELL2O00472 640 aaPredicted RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 ERC2O15083 957 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 CHUKO15111 745 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 ADAMTS4O75173 837 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 TADA3O75528 432 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 NTSR2O95665 410 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 TPM1P09493 284 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 SFTPCP11686 197 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 ARHGEF6Q15052 776 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 INTS6LQ5JSJ4 861 aaKnown RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 CCDC158Q5M9N0 1113 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 CC2D1AQ6P1N0 951 aaPredicted RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 ERC1Q8IUD2 1116 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 ZBTB8BQ8NAP8 495 aaPredicted RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 CFAP61Q8NHU2 1237 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 RABGGTAQ92696 567 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 CCDC47Q96A33 483 aaKnown RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 HOOK2Q96ED9 719 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 C8orf37Q96NL8 207 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 CLIC6Q96NY7 704 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 NLRP3Q96P20 1036 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 OSBPL5Q9H0X9 879 aaPredicted RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 CIDEBQ9UHD4 219 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 MAGEL2Q9UJ55 1249 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 GNEQ9Y223 722 aaKnown RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 SCINQ9Y6U3 715 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 ZMYM6O95789 1325 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 ERVV-1B6SEH8 477 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 IKBKBO14920 756 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 ATP6V1G1O75348 118 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 ALDH1L1O75891 902 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 RASGRP1O95267 797 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 KRT15P19012 456 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 TPP2P29144 1249 aaPredicted RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 ADD2P35612 726 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 SCNN1DP51172 638 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 CSE1LP55060 971 aaKnown RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 CLCQ05315 142 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 MTMR1Q13613 665 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 MRPL58Q14197 206 aaKnown RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 XRRA1Q6P2D8 792 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 CRELD2Q6UXH1 353 aaPredicted RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 ATG9AQ7Z3C6 839 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 TTC30AQ86WT1 665 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 LILRB1Q8NHL6 650 aaPredicted RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 SSH1Q8WYL5 1049 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 CCDC74AQ96AQ1 378 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 SNX27Q96L92 541 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 OSBPL9Q96SU4 736 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 C12orf49Q9H741 205 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 HERC5Q9UII4 1024 aaKnown RBP2.53□□□□□ -2
NEDD4-205ENST00000506154 TREHO43280 583 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 PDE8AO60658 829 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 APOL3O95236 402 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 PRKAR2BP31323 418 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 CD97P48960 835 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 SMTNP53814 917 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 EMP3P54852 163 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 EVCP57679 992 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 GPSM2P81274 684 aa2.53□□□□□ -2
NEDD4-205ENST00000506154 APOBRQ0VD83 1088 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms