RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ABHD15Q6UXT9 468 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 NOSTRINQ8IVI9 506 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 CKAP2LQ8IYA6 745 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 USP38Q8NB14 1042 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 ERMNQ8TAM6 284 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 KAT2BQ92831 832 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 PGBD1Q96JS3 809 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 DISC1Q9NRI5 854 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 HDAC6Q9UBN7 1215 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 PCDHA12Q9UN75 941 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
NR1I3-220ENST00000505005 SQORQ9Y6N5 450 aa11.11□□□□□ -0.63
NR1I3-220ENST00000505005 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
NR1I3-220ENST00000505005 GRIN2DO15399 1336 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 MYH9P35579 1960 aaKnown RBP11.1□□□□□ -0.63
NR1I3-220ENST00000505005 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 BTBD18B2RXH4 712 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 K7ELQ4 463 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-220ENST00000505005 MSH4O15457 936 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 BAIAP3O94812 1187 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 LARGE1O95461 756 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 FGBP02675 491 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 SMIM10L2AP0DMW4 78 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 SMIM10L2BP0DMW5 78 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 SELPP16109 830 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 MUTP22033 750 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.63
NR1I3-220ENST00000505005 CHMP4BP1P59074 171 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 PSMC6P62333 389 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 SP4Q02446 784 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 PPFIA1Q13136 1202 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 PPP2R5CQ13362 524 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 CUL4AQ13619 759 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 NPY5RQ15761 445 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 LRIT3Q3SXY7 679 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 TMEM63BQ5T3F8 832 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 POTEBQ6S5H4 581 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 MIER3Q7Z3K6 550 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 BRAPQ7Z569 592 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 CYP2W1Q8TAV3 490 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 RASGRP4Q8TDF6 673 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 ATP8B4Q8TF62 1192 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 APBB2Q92870 758 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 NOC4LQ9BVI4 516 aaKnown RBP11.1□□□□□ -0.63
NR1I3-220ENST00000505005 RNPEPQ9H4A4 650 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 IL23AQ9NPF7 189 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 TRPC6Q9Y210 931 aa11.1□□□□□ -0.63
NR1I3-220ENST00000505005 MAFBQ9Y5Q3 323 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-220ENST00000505005 ALPK3Q96L96 1907 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 DHX15O43143 795 aaKnown RBP11.09□□□□□ -0.63
NR1I3-220ENST00000505005 GAS2O43903 313 aaKnown RBP11.09□□□□□ -0.63
NR1I3-220ENST00000505005 NEMFO60524 1076 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 JAK2O60674 1132 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 PPFIA3O75145 1194 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 PSMD10O75832 226 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 P4HBP07237 508 aaKnown RBP11.09□□□□□ -0.63
NR1I3-220ENST00000505005 ZNF286BP0CG31 522 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 XRCC6P12956 609 aaKnown RBP eCLIP11.09□□□□□ -0.63
NR1I3-220ENST00000505005 SYN1P17600 705 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 GJB2P29033 226 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 HOXC8P31273 242 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 DNM2P50570 870 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 ITGB3BPQ13352 177 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-220ENST00000505005 CALCRLQ16602 461 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 XKR3Q5GH77 459 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 SWSAP1Q6NVH7 229 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 SERINC5Q86VE9 423 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 BADQ92934 168 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 TRIM43Q96BQ3 446 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-220ENST00000505005 ZFP91Q96JP5 570 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-220ENST00000505005 AIFM3Q96NN9 605 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 TRPV6Q9H1D0 765 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 KCNMB3Q9NPA1 279 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 PKD2L1Q9P0L9 805 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 BRCA2P51587 3418 aa11.09□□□□□ -0.63
NR1I3-220ENST00000505005 SMIM35A0A1B0GVV1 85 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 RSPH10B2B2RC85 870 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 KIF28PB7ZC32 967 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 IQCF3P0C7M6 154 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 RSPH10BP0C881 870 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 QARSP47897 775 aaKnown RBP11.08□□□□□ -0.64
NR1I3-220ENST00000505005 PSMC5P62195 406 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 MDM2Q00987 491 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-220ENST00000505005 BECN1Q14457 450 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 PDIA5Q14554 519 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 EPHA7Q15375 998 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 GRIK4Q16099 956 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 HAUS3Q68CZ6 603 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 GDF6Q6KF10 455 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-220ENST00000505005 LRRC8DQ7L1W4 858 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 ETNPPLQ8TBG4 499 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 PHOSPHO2Q8TCD6 241 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 TNFRSF25Q93038 417 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 LENG9Q96B70 501 aa11.08□□□□□ -0.64
NR1I3-220ENST00000505005 ZSCAN16Q9H4T2 348 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-220ENST00000505005 TRMT13Q9NUP7 481 aaKnown RBP11.08□□□□□ -0.64
NR1I3-220ENST00000505005 KCNG1Q9UIX4 513 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms